Trait

au.csiro.variantspark.cli.args

HailArgs

Related Doc: package args

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trait HailArgs extends SparkApp

Common options and properties for applications using Hail.

Linear Supertypes
SparkApp, Logging, AnyRef, Any
Known Subclasses
GenerateFamilyCmd, GeneratePopulationCmd
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Inherited
  1. HailArgs
  2. SparkApp
  3. Logging
  4. AnyRef
  5. Any
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Visibility
  1. Public
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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. lazy val actualMinPartitions: Int

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  5. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  7. lazy val conf: SparkConf

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    Definition Classes
    SparkApp

  8. def createConf: SparkConf

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    Definition Classes
    HailArgs → SparkApp

  9. def defaultMasterUrl: String

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    Definition Classes
    SparkApp

  10. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  11. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  12. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  13. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  14. def hashCode(): Int

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    Definition Classes
    AnyRef → Any

  15. lazy val hc: HailContext

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  16. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  17. def isTraceEnabled(): Boolean

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    Attributes
    protected
    Definition Classes
    Logging

  18. def log: Logger

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    Attributes
    protected
    Definition Classes
    Logging

  19. def logDebug(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  20. def logDebug(msg: ⇒ String): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  21. def logError(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  22. def logError(msg: ⇒ String): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  23. def logInfo(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  24. def logInfo(msg: ⇒ String): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  25. def logName: String

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    Attributes
    protected
    Definition Classes
    Logging

  26. def logTrace(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  27. def logTrace(msg: ⇒ String): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  28. def logWarning(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  29. def logWarning(msg: ⇒ String): Unit

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    Attributes
    protected
    Definition Classes
    Logging

  30. val minPartitions: Int

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  31. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  32. final def notify(): Unit

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    Definition Classes
    AnyRef

  33. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  34. implicit lazy val spark: SparkSession

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    Definition Classes
    SparkApp

  35. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  36. def toString(): String

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    Definition Classes
    AnyRef → Any

  37. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  38. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  39. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Deprecated Value Members

  1. implicit lazy val sc: SparkContext

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    Definition Classes
    SparkApp
    Annotations
    @deprecated
    Deprecated

  2. lazy val sqlContext: SQLContext

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    Definition Classes
    SparkApp
    Annotations
    @deprecated
    Deprecated

Inherited from SparkApp

Inherited from Logging

Inherited from AnyRef

Inherited from Any

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