Object

au.csiro.variantspark.hail.variant.io

ExportVCFEx

Related Doc: package io

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object ExportVCFEx

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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. def appendDoubleArray(sb: StringBuilder, toAppend: Array[Double]): Unit

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  5. def appendIntArray(sb: StringBuilder, toAppend: Array[Int]): Unit

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  6. def appendIntArrayOption(sb: StringBuilder, toAppend: Option[Array[Int]]): Unit

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  7. def appendIntOption(sb: StringBuilder, toAppend: Option[Int]): Unit

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  8. def apply(gds: GenericDataset, path: String, append: Option[String] = None, exportPP: Boolean = false, parallel: Boolean = false): Unit

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  9. final def asInstanceOf[T0]: T0

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  10. def checkFormatSignature(sig: TStruct): Unit

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  11. def clone(): AnyRef

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  12. def emitFormatField(f: Field, sb: StringBuilder, a: Annotation): Unit

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  13. def emitInfo(f: Field, sb: StringBuilder, value: Annotation, wroteLast: Boolean): Boolean

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  14. final def eq(arg0: AnyRef): Boolean

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  15. def equals(arg0: Any): Boolean

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  16. def finalize(): Unit

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  17. def formatType(f: Field): String

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  18. def formatType(t: Type): Option[String]

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  19. final def getClass(): Class[_]

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  20. def hashCode(): Int

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  21. def infoNumber(t: Type): String

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  22. def infoType(f: Field): String

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  23. def infoType(t: Type): Option[String]

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  24. final def isInstanceOf[T0]: Boolean

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  25. final def ne(arg0: AnyRef): Boolean

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  26. final def notify(): Unit

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  27. final def notifyAll(): Unit

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  28. def strVCF(sb: StringBuilder, elementType: Type, a: Annotation): Unit

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  29. final def synchronized[T0](arg0: ⇒ T0): T0

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  30. def toPhasedString(call: Call): String

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  31. def toString(): String

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  32. def validFormatType(typ: Type): Boolean

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  33. final def wait(): Unit

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  34. final def wait(arg0: Long, arg1: Int): Unit

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  35. final def wait(arg0: Long): Unit

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  36. def writeGenotype(sb: StringBuilder, g: Genotype): Unit

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  37. def writeGenotype(sb: StringBuilder, sig: TStruct, fieldOrder: Array[Int], a: Annotation): Unit

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