1. akka
   1. akka.pattern
2. com
   1. com.cra
      1. com.cra.figaro
         1. com.cra.figaro.algorithm
            1. (object)(class)Abstraction
            2. (object)(trait)AbstractionScheme
            3. (object)
               AckResponse
            4. (trait)Algorithm
            5. (class)AlgorithmActiveException
            6. (class)AlgorithmException
            7. (class)AlgorithmInactiveException
            8. (trait)Anytime
            9. (class)AnytimeAlgorithmException
            10. (trait)AnytimeMPE
            11. (trait)AnytimeProbEvidence
            12. (trait)AnytimeProbQuery
            13. (trait)BaseProbQueryAlgorithm
            14. (case class)ExceptionResponse
            15. (case class)Handle
            16. (trait)LazyAlgorithm
            17. (class)Message
            18. (trait)MPEAlgorithm
            19. (trait)OneTime
            20. (trait)OneTimeMPE
            21. (trait)OneTimeProbEvidence
            22. (trait)OneTimeProbQuery
            23. (trait)ParameterLearner
            24. (object)(trait)PointMapper
            25. (case class)Predicate
            26. (trait)ProbEvidenceAlgorithm
            27. (trait)ProbEvidenceQuery
            28. (trait)ProbQueryAlgorithm
            29. (class)Response
            30. (class)Service
            31. (trait)StreamableProbQueryAlgorithm
            32. (class)UnsupportedAlgorithmException
            33. (object)(class)Values
            34. (trait)ValuesMaker
            1. com.cra.figaro.algorithm.decision
               1. (class)AnytimeDecisionMetropolisHastings
               2. (trait)DecisionAlgorithm
               3. (object)(class)DecisionImportance
               4. (object)(class)DecisionMetropolisHastings
               5. (object)(trait)DecisionPolicy
               6. (object)(class)DecisionPolicyExact
               7. (object)(class)DecisionPolicyNN
               8. (object)
                  DecisionVariableElimination
               9. (class)MultiDecisionAlgorithm
               10. (object)
                   MultiDecisionImportance
               11. (object)
                   MultiDecisionMetropolisHastings
               12. (object)(class)MultiDecisionVariableElimination
               13. (class)OneTimeDecisionMetropolisHastings
               14. (class)OneTimeMultiDecisionImportance
               15. (class)OneTimeMultiDecisionMetropolisHastings
               16. (trait)OneTimeProbQueryDecision
               17. (trait)ProbabilisticVariableEliminationDecision
               18. (class)ProbQueryVariableEliminationDecision
               1. com.cra.figaro.algorithm.decision.index
                  1. (object)(trait)Distance
                  2. (object)(class)FlatIndex
                  3. (class)Index
                  4. (trait)INode
                  5. (trait)L2Norm
                  6. (trait)LNode
                  7. (class)Node
                  8. (class)TupleDistance
                  9. (case class)TupleDistance2
                  10. (object)(class)VPIndex
            2. com.cra.figaro.algorithm.factored
               1. (case class)AbstractFactor
               2. (class)ConstantDensityEstimator
               3. (class)DensityEstimator
               4. (class)DensityException
               5. (trait)DoubleDensityEstimator
               6. (trait)FactoredAlgorithm
               7. (trait)IntDensityEstimator
               8. (object)(class)MPEVariableElimination
               9. (object)(class)ParticleGenerator
               10. (trait)ProbabilisticVariableElimination
               11. (class)ProbQueryVariableElimination
               12. (object)(class)SufficientStatisticsVariableElimination
               13. (object)(trait)VariableElimination
               14. (case class)VariableInfo
               15. (object)(class)VEGraph
               1. com.cra.figaro.algorithm.factored.beliefpropagation
                  1. (trait)AnytimeInnerBPHandler
                  2. (trait)AnytimeProbabilisticBeliefPropagation
                  3. (class)BasicFactorGraph
                  4. (object)(trait)BeliefPropagation
                  5. (trait)FactorGraph
                  6. (case class)FactorNode
                  7. (trait)InnerBPHandler
                  8. (object)(class)MPEBeliefPropagation
                  9. (trait)Node
                  10. (trait)OneTimeInnerBPHandler
                  11. (trait)OneTimeProbabilisticBeliefPropagation
                  12. (trait)OneTimeProbEvidenceBeliefPropagation
                  13. (trait)ProbabilisticBeliefPropagation
                  14. (object)(trait)ProbEvidenceBeliefPropagation
                  15. (class)ProbQueryBeliefPropagation
                  16. (case class)VariableNode
               2. com.cra.figaro.algorithm.factored.factors
                  1. (class)BasicFactor
                  2. (case class)BooleanSemiring
                  3. (case class)BoundsSumProductSemiring
                  4. (class)ConditionalSelector
                  5. (class)ConstraintFactor
                  6. (trait)DivideableSemiRing
                  7. (class)ElementVariable
                  8. (object)(trait)Factor
                  9. (class)Indices
                  10. (class)InternalChainVariable
                  11. (class)InternalVariable
                  12. (trait)LogConvertibleSemiRing
                  13. (case class)LogMaxProductSemiring
                  14. (case class)LogSumProductSemiring
                  15. (case class)MaxProductSemiring
                  16. (class)ParameterizedVariable
                  17. (trait)Semiring
                  18. (class)SparseFactor
                  19. (object)(class)SufficientStatisticsSemiring
                  20. (case class)SumProductSemiring
                  21. (case class)SumProductUtilitySemiring
                  22. (object)(class)Variable
                  1. com.cra.figaro.algorithm.factored.factors.factory
                     1. (object)
                        ApplyFactory
                     2. (object)
                        ChainFactory
                     3. (object)
                        ComplexFactory
                     4. (object)
                        ConstraintFactory
                     5. (object)
                        DistributionFactory
                     6. (trait)FactorMaker
                     7. (object)
                        Factory
                     8. (object)
                        SelectFactory
                     9. (object)
                        StarFactory
               3. com.cra.figaro.algorithm.factored.gibbs
                  1. (object)(class)BlockSampler
                  2. (trait)Cached
                  3. (trait)ChainApplyBlockingGibbs
                  4. (trait)DoubleWeight
                  5. (trait)FactorProduct
                  6. (trait)GaussianWeight
                  7. (object)(trait)Gibbs
                  8. (trait)ProbabilisticGibbs
                  9. (class)ProbQueryGibbs
                  10. (class)SimpleBlockSampler
                  11. (class)StateNotFoundException
                  12. (object)
                      WalkSAT
            3. com.cra.figaro.algorithm.filtering
               1. (object)(class)FactoredFrontier
               2. (trait)FFBPHandler
               3. (class)Filtering
               4. (trait)OneTimeFiltering
               5. (class)OneTimeParticleFilter
               6. (class)ParFiltering
               7. (class)ParOneTimeParticleFilter
               8. (object)
                  ParParticleFilter
               9. (object)(trait)ParticleFilter
               10. (class)Snapshot
               11. (class)State
               12. (class)UniverseWindow
            4. com.cra.figaro.algorithm.lazyfactored
               1. (object)
                  BoundedProbFactor
               2. (class)Extended
               3. (object)(class)LazyValues
               4. (class)LazyVariableElimination
               5. (case class)Regular
               6. (case class)Star
               7. (object)(class)ValueSet
               1. com.cra.figaro.algorithm.lazyfactored.factory
                  1. (object)
                     ApplyFactory
                  2. (object)
                     ChainFactory
                  3. (object)
                     ComplexFactory
                  4. (object)
                     DistributionFactory
                  5. (object)
                     Factory
                  6. (object)
                     SelectFactory
                  7. (object)
                     StarFactory
            5. com.cra.figaro.algorithm.learning
               1. (object)(class)EMTerminationCriteria
               2. (object)
                  EMWithBP
               3. (object)
                  EMWithImportance
               4. (object)
                  EMWithMH
               5. (object)
                  EMWithVE
               6. (trait)ExpectationMaximization
               7. (class)ExpectationMaximizationWithFactors
               8. (class)GeneralizedEM
               9. (class)GeneralizedOnlineEM
               10. (class)MaxIterations
               11. (trait)OnlineExpectationMaximization
               12. (class)OnlineExpectationMaximizationWithFactors
               13. (class)SufficientStatisticsFactor
               14. (class)SufficientStatisticsMagnitudes
            6. com.cra.figaro.algorithm.online
               1. (trait)Online
            7. com.cra.figaro.algorithm.sampling
               1. (class)AnytimeElementSampler
               2. (class)AnytimeMetropolisHastings
               3. (class)AnytimeMetropolisHastingsAnnealer
               4. (trait)AnytimeMPESampler
               5. (trait)AnytimeProbEvidenceSampler
               6. (trait)AnytimeProbQuerySampler
               7. (trait)AnytimeSampler
               8. (trait)BaseProbQuerySampler
               9. (class)BaseUnweightedSampler
               10. (case class)DisjointScheme
               11. (object)(class)ElementSampler
               12. (object)
                   EmptyProposalScheme
               13. (case class)FinalScheme
               14. (object)
                   Forward
               15. (class)ForwardWeighter
               16. (object)(class)Importance
               17. (class)LikelihoodWeighter
               18. (object)(class)MetropolisHastings
               19. (object)(class)MetropolisHastingsAnnealer
               20. (class)OneTimeElementSampler
               21. (class)OneTimeMetropolisHastings
               22. (class)OneTimeMetropolisHastingsAnnealer
               23. (trait)OneTimeMPESampler
               24. (trait)OneTimeProbEvidenceSampler
               25. (trait)OneTimeProbQuerySampler
               26. (trait)OneTimeSampler
               27. (object)(class)ProbEvidenceSampler
               28. (trait)ProbQuerySampler
               29. (object)(class)ProposalScheme
               30. (trait)Sampler
               31. (object)(class)Schedule
               32. (case class)SwitchScheme
               33. (case class)TypedScheme
               34. (case class)UntypedScheme
               35. (trait)UnweightedSampler
               36. (class)WeightedSampler
               1. com.cra.figaro.algorithm.sampling.parallel
                  1. (trait)ParAnytime
                  2. (object)
                     ParImportance
                  3. (trait)ParOneTime
                  4. (class)ParSampler
                  5. (trait)ParSamplingAlgorithm
            8. com.cra.figaro.algorithm.structured
               1. (class)ApplyComponent
               2. (class)Bounds
               3. (class)ChainComponent
               4. (class)ComponentCollection
               5. (object)
                  ComponentHash
               6. (class)ExpandableComponent
               7. (object)
                  Lower
               8. (class)MakeArrayComponent
               9. (class)NestedProblem
               10. (class)Problem
               11. (class)ProblemComponent
               12. (object)
                   Range
               13. (object)
                   Upper
               1. com.cra.figaro.algorithm.structured.algorithm
                  1. (class)StructuredMPEAlgorithm
                  2. (class)StructuredProbQueryAlgorithm
                  1. com.cra.figaro.algorithm.structured.algorithm.flat
                     1. (object)(class)FlatBP
                     2. (object)(class)FlatGibbs
                     3. (object)(class)FlatVE
                  2. com.cra.figaro.algorithm.structured.algorithm.hybrid
                     1. (object)(class)RaisingVE
                     2. (object)(class)StructuredVEBPChooser
                     3. (object)(class)StructuredVEBPGibbsChooser
                     4. (object)(class)StructuredVEGibbsChooser
                  3. com.cra.figaro.algorithm.structured.algorithm.structured
                     1. (object)(class)StructuredBP
                     2. (object)(class)StructuredGibbs
                     3. (object)(class)StructuredMPEBP
                     4. (object)(class)StructuredMPEVE
                     5. (object)(class)StructuredVE
               2. com.cra.figaro.algorithm.structured.solver
                  1. (class)BPSolver
                  2. (class)GibbsSolver
                  3. (class)VESolver
               3. com.cra.figaro.algorithm.structured.strategy
                  1. com.cra.figaro.algorithm.structured.strategy.decompose
                     1. (trait)BackwardChain
                     2. (trait)Decomposable
                     3. (object)
                        DecompositionStrategy
                     4. (object)
                        RaisingStrategy
                  2. com.cra.figaro.algorithm.structured.strategy.solve
                     1. (class)ConstantStrategy
                     2. (class)SolvingStrategy
                     3. (class)VEBPGibbsStrategy
                     4. (class)VEBPStrategy
                     5. (class)VEGibbsStrategy
         2. com.cra.figaro.experimental
            1. com.cra.figaro.experimental.collapsedgibbs
               1. (object)
                  CollapsedGibbs
               2. (trait)CollapsedProbabilisticGibbs
               3. (class)CollapsedProbQueryGibbs
               4. (trait)DeterministicCollapseStrategy
               5. (trait)FactorSizeCollapseStrategy
               6. (trait)HeuristicCollapseStrategy
               7. (trait)RecurringCollapseStrategy
            2. com.cra.figaro.experimental.marginalmap
               1. (trait)AnytimeMarginalMAP
               2. (class)AnytimeProbEvidenceMarginalMAP
               3. (trait)MarginalMAPAlgorithm
               4. (object)(class)MarginalMAPBeliefPropagation
               5. (class)MarginalMAPVEStrategy
               6. (trait)OneTimeMarginalMAP
               7. (class)OneTimeProbEvidenceMarginalMAP
               8. (object)(class)ProbEvidenceMarginalMAP
               9. (class)StructuredMarginalMAPAlgorithm
               10. (object)(class)StructuredMarginalMAPVE
            3. com.cra.figaro.experimental.normalproposals
               1. (class)AtomicBeta
               2. (class)AtomicExponential
               3. (class)AtomicGamma
               4. (class)AtomicInverseGamma
               5. (class)AtomicNormal
               6. (class)AtomicUniform
               7. (object)
                  Beta
               8. (object)
                  Exponential
               9. (object)
                  Gamma
               10. (object)
                   InverseGamma
               11. (object)
                   Normal
               12. (trait)NormalProposer
               13. (object)
                   Uniform
            4. com.cra.figaro.experimental.particlebp
               1. (trait)AnytimeParticleBeliefPropagation
               2. (class)AutomaticDensityEstimator
               3. (trait)NormalKernelDensityEstimator
               4. (trait)OneTimeParticleBeliefPropagation
               5. (object)(trait)ParticleBeliefPropagation
               6. (class)ProbQueryParticleBeliefPropagation
         3. com.cra.figaro.language
            1. (class)Aggregate
            2. (object)(class)Apply
            3. (class)Apply1
            4. (class)Apply2
            5. (class)Apply3
            6. (class)Apply4
            7. (class)Apply5
            8. (object)
               ApplyC
            9. (trait)ArrayParameter
            10. (object)
                AssertEvidence
            11. (trait)Atomic
            12. (class)AtomicDist
            13. (class)AtomicFlip
            14. (class)AtomicSelect
            15. (trait)Cacheable
            16. (object)(class)CachingChain
            17. (object)(class)Chain
            18. (class)CompoundDist
            19. (class)CompoundFlip
            20. (class)CompoundSelect
            21. (case class)Condition
            22. (object)(class)Constant
            23. (case class)Constraint
            24. (trait)Continuous
            25. (trait)Creatable
            26. (object)
                Create
            27. (class)Deterministic
            28. (object)(class)Dist
            29. (trait)DoubleParameter
            30. (object)(class)Element
            31. (object)(trait)ElementCollection
            32. (class)ElementState
            33. (class)Evidence
            34. (class)EvidenceNotAllowedException
            35. (object)(trait)Flip
            36. (trait)HasDensity
            37. (trait)IfArgsCacheable
            38. (case class)Indirect
            39. (object)(class)Inject
            40. (class)InvalidEvidenceException
            41. (case class)LogConstraint
            42. (class)MultiValuedReferenceElement
            43. (object)(case class)Name
            44. (case class)NamedEvidence
            45. (object)(class)NonCachingChain
            46. (case class)Observation
            47. (trait)Parameter
            48. (trait)Parameterized
            49. (class)ParameterizedFlip
            50. (class)ParameterizedSelect
            51. (trait)Pragma
            52. (object)(trait)Reference
            53. (class)ReferenceElement
            54. (object)(class)Select
            55. (trait)SingleParameterized
            56. (class)SingleValuedReferenceElement
            57. (object)(class)Universe
            58. (class)UniverseState
         4. com.cra.figaro.library
            1. com.cra.figaro.library.atomic
               1. com.cra.figaro.library.atomic.continuous
                  1. (class)AtomicBeta
                  2. (class)AtomicDirichlet
                  3. (class)AtomicExponential
                  4. (class)AtomicGamma
                  5. (class)AtomicInverseGamma
                  6. (class)AtomicMultivariateNormal
                  7. (class)AtomicNormal
                  8. (class)AtomicUniform
                  9. (object)(trait)Beta
                  10. (object)
                      BetaParameter
                  11. (class)CompoundBeta
                  12. (class)CompoundDirichlet
                  13. (class)CompoundExponential
                  14. (class)CompoundGamma
                  15. (class)CompoundNormal
                  16. (class)CompoundUniform
                  17. (object)(trait)Dirichlet
                  18. (object)
                      DirichletParameter
                  19. (object)(trait)Exponential
                  20. (object)(trait)Gamma
                  21. (class)GammaCompoundK
                  22. (object)
                      InverseGamma
                  23. (object)(class)KernelDensity
                  24. (class)MultivariateCompoundNormal
                  25. (object)
                      MultivariateNormal
                  26. (class)MultivariateNormalCompoundMean
                  27. (object)(trait)Normal
                  28. (class)NormalCompoundMean
                  29. (class)NormalCompoundVariance
                  30. (object)(trait)Uniform
                  31. (object)
                      Util
               2. com.cra.figaro.library.atomic.discrete
                  1. (class)AtomicBinomial
                  2. (class)AtomicGeometric
                  3. (class)AtomicPoisson
                  4. (class)AtomicSwitchingFlip
                  5. (class)AtomicUniform
                  6. (object)
                     Binomial
                  7. (class)BinomialFixedNumTrials
                  8. (class)CompoundAtomic
                  9. (class)CompoundBinomial
                  10. (class)CompoundGeometric
                  11. (class)CompoundSwitchingFlip
                  12. (class)CompoundUniform
                  13. (object)(class)FromRange
                  14. (object)
                      Geometric
                  15. (trait)OneShifter
                  16. (class)ParameterizedBinomialFixedNumTrials
                  17. (object)
                      Poisson
                  18. (object)(trait)SwitchingFlip
                  19. (object)
                      Uniform
                  20. (object)
                      Util
            2. com.cra.figaro.library.cache
               1. (class)Cache
               2. (class)MHCache
               3. (class)NoCache
               4. (class)PermanentCache
            3. com.cra.figaro.library.collection
               1. (object)(trait)Container
               2. (class)ContainerElement
               3. (class)FixedSizeArray
               4. (class)FixedSizeArrayElement
               5. (trait)IncrementalProcess
               6. (trait)IndependentProcess
               7. (class)MakeArray
               8. (trait)Process
               9. (class)ProcessElement
               10. (object)
                   VariableSizeArray
            4. com.cra.figaro.library.compound
               1. (object)
                  *
               2. (object)
                  ^^
               3. (class)BooleanElement
               4. (object)
                  CPD
               5. (class)CPD1
               6. (class)CPD2
               7. (class)CPD3
               8. (class)CPD4
               9. (class)CPD5
               10. (class)CPDCase
               11. (class)DoubleElement
               12. (class)DuoElement
               13. (class)Eq
               14. (class)FastIf
               15. (object)(class)FoldLeft
               16. (object)
                   FoldRight
               17. (object)(class)If
               18. (class)IntElement
               19. (object)(class)IntSelector
               20. (object)(class)MakeList
               21. (class)Neq
               22. (case class)NoneOf
               23. (case class)OneOf
               24. (class)QuartetElement
               25. (class)QuintetElement
               26. (object)
                   Reduce
               27. (object)
                   RichCPD
               28. (class)RichCPD1
               29. (class)RichCPD2
               30. (class)RichCPD3
               31. (class)RichCPD4
               32. (class)RichCPD5
               33. (class)TrioElement
            5. com.cra.figaro.library.decision
               1. (class)AlgorithmDecisionException
               2. (object)(class)CachingDecision
               3. (object)(trait)Decision
               4. (class)DecisionIllegalArgumentException
               5. (case class)DecisionSample
               6. (object)
                  DecisionUtil
               7. (trait)ExactPolicyMaker
               8. (class)IllegalDecisionNetwork
               9. (class)IllegalUtilityNodeException
               10. (object)(class)NonCachingDecision
               11. (class)ParentValueNotFoundException
               12. (trait)PolicyMaker
         5. com.cra.figaro.patterns
            1. com.cra.figaro.patterns.learning
               1. (object)(class)ModelParameters
               2. (case class)ParameterArray
               3. (trait)ParameterCollection
               4. (case class)ParameterDouble
               5. (object)(class)ParameterType
               6. (case class)PrimitiveArray
               7. (case class)PrimitiveDouble
         6. com.cra.figaro.util
            1. (object)(class)ColorGradient
            2. (case class)ColorPoint
            3. (object)(class)HashMultiSet
            4. (class)HashSelectableSet
            5. (class)HeapPriorityMap
            6. (class)InvalidDistributionException
            7. (class)InvalidMultinomialIndexException
            8. (class)LessThanOneTotalProbabilityException
            9. (object)(case class)LogStatistics
            10. (class)MapResampler
            11. (trait)MultiSet
            12. (class)NegativeProbabilityException
            13. (trait)OnlineLogStatistics
            14. (object)(trait)PriorityMap
            15. (class)Resampler
            16. (trait)SelectableSet
            17. (class)ZeroTotalUnnormalizedProbabilityException
            1. com.cra.figaro.util.visualization
               1. (trait)DataView
               2. (class)EmptyTab
               3. (case class)NewResult
               4. (class)ResultHandler
               5. (object)
                  ResultsGUI
               1. com.cra.figaro.util.visualization.distribution
                  1. (class)Distribution
                  2. (class)DistributionRenderer
               2. com.cra.figaro.util.visualization.histogram
                  1. (class)Histogram
                  2. (class)HistogramRenderer
               3. com.cra.figaro.util.visualization.reduction
                  1. (object)
                     DataReduction
               4. com.cra.figaro.util.visualization.results
                  1. (case class)ContinuousData
                  2. (case class)DiscreteData
                  3. (class)NoResult
                  4. (trait)ResultsData
                  5. (class)ResultsTable
                  6. (class)ResultsTableModel
                  7. (class)ResultsView