targetIntervals
DnaResequencingFromFastqPipeline
DnaResequencingFromUnmappedBamPipeline
targets
ExamplePipeline
tmp
CreateUnmappedBamFromFastqPipeline
DnaResequencingFromFastqPipeline
DnaResequencingFromUnmappedBamPipeline
tmpDirectory
ParallelHaplotypeCaller
truthIntervals
GermlineVariantCallingPipeline
truthVcf
GermlineVariantCallingPipeline
tumorBam
DownsampleAndCallSomaticVariants
SomaticVariantCallingPipeline