Inherited from Configuration
Inherited from ConfigurationLike
Inherited from Pipeline
Inherited from LazyLogging
Inherited from Task
Inherited from Dependable
Inherited by implicit conversion any2stringadd from
Strelka to any2stringadd[Strelka]
Inherited by implicit conversion StringFormat from
Strelka to StringFormat[Strelka]
Inherited by implicit conversion Ensuring from
Strelka to Ensuring[Strelka]
Inherited by implicit conversion ArrowAssoc from
Strelka to ArrowAssoc[Strelka]
Runs the Strelka somatic variant caller from Illumina, cleans up after it and merges the results into a single VCF for downstream analysis.