Object/Class

com.fulcrumgenomics.bam

SamRecordClipper

Related Docs: class SamRecordClipper | package bam

Permalink

object SamRecordClipper

Holds types and constants related to SamRecord clipping.

Linear Supertypes
AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. SamRecordClipper
  2. AnyRef
  3. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  4. val TagsToInvalidate: Seq[String]

    Permalink

    The set of tags that should be invalidated if a read undergoes clipping.

  5. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any

  6. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  7. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef

  8. def equals(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  9. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  10. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any

  11. def hashCode(): Int

    Permalink
    Definition Classes
    AnyRef → Any

  12. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any

  13. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef

  14. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef

  15. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef

  16. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef

  17. def toString(): String

    Permalink
    Definition Classes
    AnyRef → Any

  18. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  19. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  20. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from AnyRef

Inherited from Any

Ungrouped