Class/Object

com.fulcrumgenomics.umi

DuplexConsensusPerBaseValues

Related Docs: object DuplexConsensusPerBaseValues | package umi

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case class DuplexConsensusPerBaseValues(abStrand: Boolean, bases: String, depths: Array[Short], errors: Array[Short]) extends Product with Serializable

A little class to store the per-base values for ab and ba-strand

Linear Supertypes
Serializable, Serializable, Product, Equals, AnyRef, Any
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Inherited
  1. DuplexConsensusPerBaseValues
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. AnyRef
  7. Any
Implicitly
  1. by any2stringadd
  2. by StringFormat
  3. by Ensuring
  4. by ArrowAssoc
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new DuplexConsensusPerBaseValues(abStrand: Boolean, bases: String, depths: Array[Short], errors: Array[Short])

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. def +(other: String): String

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to any2stringadd[DuplexConsensusPerBaseValues] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd

  4. def ->[B](y: B): (DuplexConsensusPerBaseValues, B)

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to ArrowAssoc[DuplexConsensusPerBaseValues] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()

  5. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  6. val abStrand: Boolean

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  7. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  8. val bases: String

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  9. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  10. val depths: Array[Short]

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  11. def ensuring(cond: (DuplexConsensusPerBaseValues) ⇒ Boolean, msg: ⇒ Any): DuplexConsensusPerBaseValues

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to Ensuring[DuplexConsensusPerBaseValues] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  12. def ensuring(cond: (DuplexConsensusPerBaseValues) ⇒ Boolean): DuplexConsensusPerBaseValues

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to Ensuring[DuplexConsensusPerBaseValues] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  13. def ensuring(cond: Boolean, msg: ⇒ Any): DuplexConsensusPerBaseValues

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to Ensuring[DuplexConsensusPerBaseValues] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  14. def ensuring(cond: Boolean): DuplexConsensusPerBaseValues

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to Ensuring[DuplexConsensusPerBaseValues] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  15. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  16. val errors: Array[Short]

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  17. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  18. def formatted(fmtstr: String): String

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to StringFormat[DuplexConsensusPerBaseValues] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()

  19. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  20. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  21. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  22. final def notify(): Unit

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    Definition Classes
    AnyRef

  23. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  24. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  25. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  26. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  27. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  28. def →[B](y: B): (DuplexConsensusPerBaseValues, B)

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    Implicit information
    This member is added by an implicit conversion from DuplexConsensusPerBaseValues to ArrowAssoc[DuplexConsensusPerBaseValues] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion any2stringadd from DuplexConsensusPerBaseValues to any2stringadd[DuplexConsensusPerBaseValues]

Inherited by implicit conversion StringFormat from DuplexConsensusPerBaseValues to StringFormat[DuplexConsensusPerBaseValues]

Inherited by implicit conversion Ensuring from DuplexConsensusPerBaseValues to Ensuring[DuplexConsensusPerBaseValues]

Inherited by implicit conversion ArrowAssoc from DuplexConsensusPerBaseValues to ArrowAssoc[DuplexConsensusPerBaseValues]

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