Class/Object

com.fulcrumgenomics.vcf

PhaseBlock

Related Docs: object PhaseBlock | package vcf

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case class PhaseBlock extends GenomicSpan with Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, GenomicSpan, Locatable, AnyRef, Any
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Inherited
  1. PhaseBlock
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. GenomicSpan
  7. Locatable
  8. AnyRef
  9. Any
Implicitly
  1. by any2stringadd
  2. by StringFormat
  3. by Ensuring
  4. by ArrowAssoc
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Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. def +(other: String): String

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to any2stringadd[PhaseBlock] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd

  4. def ->[B](y: B): (PhaseBlock, B)

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()

  5. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  6. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  7. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  8. def contains(arg0: Locatable): Boolean

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    Definition Classes
    Locatable

  9. val contig: String

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    Definition Classes
    PhaseBlock → GenomicSpan

  10. def contigsMatch(arg0: Locatable): Boolean

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    Definition Classes
    Locatable

  11. def encloses(other: GenomicSpan): Boolean

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    True if this genomic span encloses the other genomic span, false otherwise.

    True if this genomic span encloses the other genomic span, false otherwise.

    Definition Classes
    GenomicSpan

  12. val end: Int

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    Definition Classes
    PhaseBlock → GenomicSpan

  13. def ensuring(cond: (PhaseBlock) ⇒ Boolean, msg: ⇒ Any): PhaseBlock

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  14. def ensuring(cond: (PhaseBlock) ⇒ Boolean): PhaseBlock

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  15. def ensuring(cond: Boolean, msg: ⇒ Any): PhaseBlock

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  16. def ensuring(cond: Boolean): PhaseBlock

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring

  17. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  18. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  19. def formatted(fmtstr: String): String

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to StringFormat[PhaseBlock] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()

  20. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  21. def getContig(): String

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    Definition Classes
    GenomicSpan → Locatable

  22. def getEnd(): Int

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    Definition Classes
    GenomicSpan → Locatable

  23. def getLengthOnReference(): Int

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    Definition Classes
    Locatable

  24. def getStart(): Int

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    Definition Classes
    GenomicSpan → Locatable

  25. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  26. def length: Int

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    Definition Classes
    GenomicSpan

  27. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  28. final def notify(): Unit

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    Definition Classes
    AnyRef

  29. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  30. def overlaps(other: GenomicSpan): Boolean

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    True if the two genomic spans overlap, false otherwise.

    True if the two genomic spans overlap, false otherwise.

    Definition Classes
    GenomicSpan

  31. def overlaps(arg0: Locatable): Boolean

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    Definition Classes
    Locatable

  32. val start: Int

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    Definition Classes
    PhaseBlock → GenomicSpan

  33. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  34. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  35. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  36. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  37. def withinDistanceOf(arg0: Locatable, arg1: Int): Boolean

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    Definition Classes
    Locatable

  38. def →[B](y: B): (PhaseBlock, B)

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    Implicit information
    This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from GenomicSpan

Inherited from Locatable

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion any2stringadd from PhaseBlock to any2stringadd[PhaseBlock]

Inherited by implicit conversion StringFormat from PhaseBlock to StringFormat[PhaseBlock]

Inherited by implicit conversion Ensuring from PhaseBlock to Ensuring[PhaseBlock]

Inherited by implicit conversion ArrowAssoc from PhaseBlock to ArrowAssoc[PhaseBlock]

Ungrouped