Class/Object

nl.biopet.utils

Histogram

Related Docs: object Histogram | package utils

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class Histogram[T] extends Counts[T]

Linear Supertypes
Counts[T], Serializable, Serializable, AnyRef, Any
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Inherited
  1. Histogram
  2. Counts
  3. Serializable
  4. Serializable
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Instance Constructors

  1. new Histogram(_counts: Map[T, Long] = Map[T, Long]())(implicit ord: Numeric[T])

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. def +=(other: Counts[T]): Counts[T]

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    This will add an other histogram to this

    This will add an other histogram to this

    Definition Classes
    Counts
  4. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  5. def acumolateCounts(reverse: Boolean = false): Map[T, Long]

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    Returns acumolated counts

    Returns acumolated counts

    Definition Classes
    Counts
  6. def add(value: T): Unit

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    With this a value can be added to the histogram

    With this a value can be added to the histogram

    Definition Classes
    Counts
  7. def aggregateStats: Map[String, Any]

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  8. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  9. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  10. val counts: Map[T, Long]

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    Attributes
    protected[nl.biopet.utils.Counts]
    Definition Classes
    Counts
  11. def countsMap: Map[T, Long]

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    Returns histogram as map

    Returns histogram as map

    Definition Classes
    Counts
  12. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  13. def equals(other: Any): Boolean

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    Definition Classes
    Counts → AnyRef → Any
  14. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  15. def get(key: T): Option[Long]

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    Returns value if it does exist

    Returns value if it does exist

    Definition Classes
    Counts
  16. final def getClass(): Class[_]

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    Definition Classes
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  17. def hashCode(): Int

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  18. final def isInstanceOf[T0]: Boolean

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    Any
  19. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  20. final def notify(): Unit

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    Definition Classes
    AnyRef
  21. final def notifyAll(): Unit

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    AnyRef
  22. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  23. def toString(): String

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    Definition Classes
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  24. def toSummaryMap: Map[String, List[Any]]

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    Definition Classes
    Counts
  25. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  26. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
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    Annotations
    @throws( ... )
  27. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  28. def writeAggregateToTsv(file: File): Unit

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    Write histogram to a tsv/count file

  29. def writeFilesAndPlot(outputDir: File, prefix: String, xlabel: String, ylabel: String, title: String)(implicit ec: ExecutionContext): Unit

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  30. def writeHistogramToTsv(file: File): Unit

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    Write histogram to a tsv/count file

    Write histogram to a tsv/count file

    Definition Classes
    Counts

Inherited from Counts[T]

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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