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–
deprecated
nl
nl.biopet
nl.biopet.tools
nl.biopet.tools.tenxkit
(object)
(class)
DistanceHistogram
(object)
(case class)
DistanceMatrix
(object)
(case class)
GenotypeCall
(object)
(case class)
GroupCall
(object)
TenxKit
(object)
(case class)
VariantCall
nl.biopet.tools.tenxkit.calculatedistance
(case class)
AlleleDepth
(case class)
Args
(class)
ArgsParser
(object)
CalulateDistance
(object)
(case class)
FractionPairDistance
(case class)
SampleCombinationKey
nl.biopet.tools.tenxkit.calculatedistance.methods
(class)
Chi2
(class)
Chi2Pow
(class)
DepthPow
(object)
(trait)
Method
(object)
(class)
Pow
nl.biopet.tools.tenxkit.cellreads
(case class)
Args
(class)
ArgsParser
(object)
CellReads
nl.biopet.tools.tenxkit.evalsubgroups
(case class)
Args
(class)
ArgsParser
(object)
EvalSubGroups
nl.biopet.tools.tenxkit.extractcellfastqs
(case class)
Args
(class)
ArgsParser
(object)
ExtractCellFastqs
nl.biopet.tools.tenxkit.extractgroupvariants
(case class)
Args
(class)
ArgsParser
(object)
ExtractGroupVariants
nl.biopet.tools.tenxkit.groupdistance
(case class)
Args
(class)
ArgsParser
(object)
GroupDistance
nl.biopet.tools.tenxkit.mergebams
(case class)
Args
(class)
ArgsParser
(object)
MergeBams
(object)
(class)
PrefixIterator
nl.biopet.tools.tenxkit.variantcalls
(object)
(case class)
AlleleCount
(case class)
Args
(class)
ArgsParser
(object)
CellVariantcaller
(case class)
Cutoffs
(case class)
Position
(case class)
PositionBases
(object)
(class)
ReadBam
(case class)
SampleAllele
(object)
(case class)
SampleBase