This is the parser object that will be tested.
Force description to be written for each tool.
Returns an empty/default args case class
Force an example to be written for each tool
This is the main entry point of the tool
Force a manual to be written for each tool
Universal text referring to BIOPET.
Converts args to a Args case class
Universal contact text
Universal contributing text
Universal text for pointing to the documentation.
Convert and tests args
Outputs markdown documentation for LAIKA processing.
Outputs markdown documentation for LAIKA processing.
outputs the Markdown documentation in this directory
Generates the README
Generates the README
The readme file
Universal installation text
Which chapters should be on the tool documentation's main page
Which chapters should be in the README
This will return the name of the tool
Convert and *not* tests args
This is the tool name to be used in URL.
This is the tool name to be used in URL. Can be overwritten.
Creates a html formatted usage string
Trait for biopet tools, sets some default args, adds documentation generator