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com.github.jonnylaw.model

POMP

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object POMP

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Type Members

  1. type Eta = Vector[Double]

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  2. type Gamma = Double

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  3. type LogLikelihood = Double

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  4. type Observation = Double

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  5. type StepFunction = (SdeParameter) ⇒ (State, TimeIncrement) ⇒ Rand[State]

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  6. type Time = Double

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  7. type TimeIncrement = Double

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Value Members

  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. def BernoulliModel(stepFun: StepFunction): UnparamModel

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    The bernoulli model with a one dimensional latent state

    The bernoulli model with a one dimensional latent state

    stepFun

    a solution to a diffusion process

  5. def LinearModel(stepFun: StepFunction): UnparamModel

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    A linear unparameterised model

    A linear unparameterised model

    stepFun

    a solution to a diffusion process representing the evolution of the latent state

    returns

    an UnparamModel which can be composed with other models

  6. def LogGaussianCox(stepFun: StepFunction): UnparamModel

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    The Log-Gaussian Cox-Process is used to model time to event data with log-gaussian varying hazard rate

  7. def PoissonModel(stepFun: StepFunction): UnparamModel

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    The Poisson unparameterised model with a one dimensional latent state

    The Poisson unparameterised model with a one dimensional latent state

    stepFun

    a solution to a diffusion process representing the evolution of the latent space

    returns

    a Poisson UnparamModel which can be composed with other UnparamModels

  8. def SeasonalModel(period: Int, harmonics: Int, stepFun: StepFunction): UnparamModel

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    A seasonal model

    A seasonal model

    period

    the period of the seasonality

    harmonics

    the number of harmonics to use in the seasonal model

    stepFun

    a solution to a diffusion process representing the latent state

  9. final def asInstanceOf[T0]: T0

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  10. implicit def bool2obs(b: Boolean): Observation

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  11. def clone(): AnyRef

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  12. final def eq(arg0: AnyRef): Boolean

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  13. def equals(arg0: Any): Boolean

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  14. def finalize(): Unit

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  15. final def getClass(): Class[_]

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  16. def hashCode(): Int

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  17. final def isInstanceOf[T0]: Boolean

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  18. final def ne(arg0: AnyRef): Boolean

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  19. def negativeBinomial(stepFun: StepFunction): UnparamModel

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  20. final def notify(): Unit

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  21. final def notifyAll(): Unit

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  22. implicit def obs2bool(o: Observation): Boolean

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  23. def studentTModel(stepFun: StepFunction, df: Int): UnparamModel

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    Generalised student t model

    Generalised student t model

    stepFun

    the diffusion process solution to use for this model

    returns

    an unparameterised model of the Student-T model, which can be composed with other models

  24. final def synchronized[T0](arg0: ⇒ T0): T0

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  25. def toString(): String

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  26. final def wait(): Unit

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  27. final def wait(arg0: Long, arg1: Int): Unit

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  28. final def wait(arg0: Long): Unit

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