Package htsjdk.tribble
package htsjdk.tribble
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ClassDescriptionSimple basic class providing much of the basic functionality of codecs Every concrete subclass must implement
FeatureCodec.canDecode(String)to indicate whether it can decode the file.jrobinsoAsciiFeatureCodec<T extends Feature>A convenience base class for codecs that want to read in features from ASCII lines.BinaryFeatureCodec<T extends Feature>Implements common methods ofFeatureCodecs that read fromPositionalBufferedStreams.CloseableTribbleIterator<T extends Feature>The basic iterator we use in Tribble, which allows closing and basic iteration.Marker interface for Locatables with Tribble support.The base interface for classes that read in features.A class to represent a header of a feature containing file.FeatureReader<T extends Feature>the basic interface that feature sources need to matchA mutable concrete Feature.Created by IntelliJ IDEA.An interface for features provided via an interval file, e.g.A simple concrete Feature.Common, tribble wide constants and static functionsA reader for text feature files (i.e.