onlyNegativeStrands
CoverageArgs
onlyPositiveStrands
CoverageArgs
org
root
outputFile
PrintADAMArgs
outputPath
ADAM2FastqArgs
CountReadKmersArgs
CountSliceKmersArgs
CoverageArgs
FlagStatArgs
MergeShardsArgs
TransformAlignmentsArgs
TransformFeaturesArgs
TransformFragmentsArgs
TransformGenotypesArgs
TransformSequencesArgs
TransformSlicesArgs
TransformVariantsArgs
ViewArgs
outputPath2
ADAM2FastqArgs
outputPathArg
ViewArgs