SingleFastqInputFormat

Value Members

1. final def !=(arg0: AnyRef): Boolean

   Definition Classes

   AnyRef

2. final def !=(arg0: Any): Boolean

   Definition Classes

   Any

3. final def ##(): Int

   Definition Classes

   AnyRef → Any

4. final def ==(arg0: AnyRef): Boolean

   Definition Classes

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5. final def ==(arg0: Any): Boolean

   Definition Classes

   Any

6. def addInputPathRecursively(arg0: List[FileStatus], arg1: FileSystem, arg2: Path, arg3: PathFilter): Unit

   Attributes

   protected[org.apache.hadoop.mapreduce.lib.input]

   Definition Classes

   FileInputFormat

   Annotations

   @throws( classOf[java.io.IOException] )

7. final def asInstanceOf[T0]: T0

   Definition Classes

   Any

8. def clone(): AnyRef

   Attributes

   protected[java.lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( ... )

9. def computeSplitSize(arg0: Long, arg1: Long, arg2: Long): Long

   Attributes

   protected[org.apache.hadoop.mapreduce.lib.input]

   Definition Classes

   FileInputFormat

10. def createRecordReader(genericSplit: InputSplit, context: TaskAttemptContext): RecordReader[Void, Text]

    Definition Classes

    SingleFastqInputFormat → InputFormat

11. final def eq(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

12. def equals(arg0: Any): Boolean

    Definition Classes

    AnyRef → Any

13. def finalize(): Unit

    Attributes

    protected[java.lang]

    Definition Classes

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    Annotations

    @throws( classOf[java.lang.Throwable] )

14. def getBlockIndex(arg0: Array[BlockLocation], arg1: Long): Int

    Attributes

    protected[org.apache.hadoop.mapreduce.lib.input]

    Definition Classes

    FileInputFormat

15. final def getClass(): Class[_]

    Definition Classes

    AnyRef → Any

16. def getFormatMinSplitSize(): Long

    Attributes

    protected[org.apache.hadoop.mapreduce.lib.input]

    Definition Classes

    FileInputFormat

17. def getSplits(arg0: JobContext): List[InputSplit]

    Definition Classes

    FileInputFormat → InputFormat

    Annotations

    @throws( classOf[java.io.IOException] )

18. def hashCode(): Int

    Definition Classes

    AnyRef → Any

19. final def isInstanceOf[T0]: Boolean

    Definition Classes

    Any

20. def isSplitable(context: JobContext, filename: Path): Boolean

    Attributes

    protected[org.bdgenomics.adam.io]

    Definition Classes

    SingleFastqInputFormat → FileInputFormat

21. def listStatus(arg0: JobContext): List[FileStatus]

    Attributes

    protected[org.apache.hadoop.mapreduce.lib.input]

    Definition Classes

    FileInputFormat

    Annotations

    @throws( classOf[java.io.IOException] )

22. def makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String], arg4: Array[String]): FileSplit

    Attributes

    protected[org.apache.hadoop.mapreduce.lib.input]

    Definition Classes

    FileInputFormat

23. def makeSplit(arg0: Path, arg1: Long, arg2: Long, arg3: Array[String]): FileSplit

    Attributes

    protected[org.apache.hadoop.mapreduce.lib.input]

    Definition Classes

    FileInputFormat

24. final def ne(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

25. final def notify(): Unit

    Definition Classes

    AnyRef

26. final def notifyAll(): Unit

    Definition Classes

    AnyRef

27. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes

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28. def toString(): String

    Definition Classes

    AnyRef → Any

29. final def wait(): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

30. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

31. final def wait(arg0: Long): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )