org.bdgenomics.adam.models

RecordGroupDictionary

object RecordGroupDictionary extends Serializable

Singleton object for creating dictionaries of record groups.

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  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
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  3. final def ##(): Int

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  4. final def ==(arg0: AnyRef): Boolean

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  5. final def ==(arg0: Any): Boolean

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  6. final def asInstanceOf[T0]: T0

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  7. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
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    @throws( ... )

  8. def empty: RecordGroupDictionary

    returns

    Returns a record group dictionary that contains no record groups.

  9. final def eq(arg0: AnyRef): Boolean

    Definition Classes
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  10. def equals(arg0: Any): Boolean

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  11. def finalize(): Unit

    Attributes
    protected[java.lang]
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    @throws( classOf[java.lang.Throwable] )

  12. def fromSAMHeader(header: SAMFileHeader): RecordGroupDictionary

    Builds a record group dictionary from a SAM file header.

    Builds a record group dictionary from a SAM file header.

    header

    SAM file header with attached read groups.

    returns

    Returns a new record group dictionary with the read groups attached to the file header.

  13. final def getClass(): Class[_]

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  14. def hashCode(): Int

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  15. final def isInstanceOf[T0]: Boolean

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  16. final def ne(arg0: AnyRef): Boolean

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  17. final def notify(): Unit

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  18. final def notifyAll(): Unit

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  19. final def synchronized[T0](arg0: ⇒ T0): T0

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  20. def toString(): String

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  21. final def wait(): Unit

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    @throws( ... )

  22. final def wait(arg0: Long, arg1: Int): Unit

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  23. final def wait(arg0: Long): Unit

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Inherited from Serializable

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