org.bdgenomics.adam.projections

VariantCallingAnnotationsField

object VariantCallingAnnotationsField extends FieldEnumeration

Enumeration of VariantCallingAnnotations field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. VariantCallingAnnotationsField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Type Members

  1. class SchemaVal extends Val with FieldValue

    An enumerated field that is part of this schema.

  2. class Val extends Value with Serializable

    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( -3501153230598116017L )

  3. abstract class Value extends Ordered[Value] with Serializable

    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( 7091335633555234129L )

  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def SchemaValue: SchemaVal

    Attributes
    protected
    Definition Classes
    FieldEnumeration

  7. final def Value(i: Int, name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  8. final def Value(name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  9. final def Value(i: Int): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  10. final def Value: Value

    Attributes
    protected
    Definition Classes
    Enumeration

  11. final def apply(x: Int): Value

    Definition Classes
    Enumeration

  12. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  13. val attributes: SchemaVal

  14. val baseQRankSum: SchemaVal

  15. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  16. val culprit: SchemaVal

  17. val downsampled: SchemaVal

  18. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  19. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  20. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  21. val fisherStrandBiasPValue: SchemaVal

  22. val genotypePriors: SchemaVal

  23. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  24. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  25. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  26. val mapq0Reads: SchemaVal

  27. final def maxId: Int

    Definition Classes
    Enumeration

  28. val mqRankSum: SchemaVal

  29. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  30. var nextId: Int

    Attributes
    protected
    Definition Classes
    Enumeration

  31. var nextName: Iterator[String]

    Attributes
    protected
    Definition Classes
    Enumeration

  32. final def notify(): Unit

    Definition Classes
    AnyRef

  33. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  34. val readPositionRankSum: SchemaVal

  35. def readResolve(): AnyRef

    Attributes
    protected
    Definition Classes
    Enumeration

  36. val recordSchema: Schema

    Definition Classes
    FieldEnumeration

  37. val rmsMapQ: SchemaVal

  38. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  39. def toString(): String

    Definition Classes
    Enumeration → AnyRef → Any

  40. def values: ValueSet

    Definition Classes
    Enumeration

  41. val variantFilters: SchemaVal

  42. val vqslod: SchemaVal

  43. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  44. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  45. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  46. final def withName(s: String): Value

    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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