org.bdgenomics.adam.sql

NucleotideContigFragment

class NucleotideContigFragment extends Product

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Product, Equals, AnyRef, Any
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  1. NucleotideContigFragment
  2. Product
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Instance Constructors

  1. new NucleotideContigFragment(contigName: Option[String], contigLength: Option[Long], description: Option[String], sequence: Option[String], index: Option[Int], start: Option[Long], end: Option[Long], length: Option[Long], fragments: Option[Int])

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  7. def canEqual(that: Any): Boolean

    Definition Classes
    NucleotideContigFragment → Equals

  8. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  9. val contigLength: Option[Long]

  10. val contigName: Option[String]

  11. val description: Option[String]

  12. val end: Option[Long]

  13. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  14. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  15. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  16. val fragments: Option[Int]

  17. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  18. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  19. val index: Option[Int]

  20. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  21. val length: Option[Long]

  22. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  23. final def notify(): Unit

    Definition Classes
    AnyRef

  24. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  25. def productArity: Int

    Definition Classes
    NucleotideContigFragment → Product

  26. def productElement(i: Int): Any

    Definition Classes
    NucleotideContigFragment → Product

  27. def productIterator: Iterator[Any]

    Definition Classes
    Product

  28. def productPrefix: String

    Definition Classes
    Product

  29. val sequence: Option[String]

  30. val start: Option[Long]

  31. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  32. def toAvro: formats.avro.NucleotideContigFragment

  33. def toString(): String

    Definition Classes
    AnyRef → Any

  34. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  35. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  36. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

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