Object/Class

org.bdgenomics.adam.rdd.sequence

FASTAInFormatter

Related Docs: class FASTAInFormatter | package sequence

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object FASTAInFormatter extends InFormatterCompanion[Sequence, Sequence, SequenceDataset, FASTAInFormatter] with Serializable

InFormatter companion that creates an InFormatter that writes FASTA.

Linear Supertypes
Serializable, Serializable, InFormatterCompanion[Sequence, Sequence, SequenceDataset, FASTAInFormatter], AnyRef, Any
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  1. FASTAInFormatter
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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. def apply(gDataset: SequenceDataset): FASTAInFormatter

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    Builds a FASTAInFormatter to write FASTA.

    Builds a FASTAInFormatter to write FASTA.

    gDataset

    GenomicDataset of Sequences. Used to get HadoopConfiguration.

    returns

    Returns a new FASTA InFormatter.

    Definition Classes
    FASTAInFormatter → InFormatterCompanion

  5. final def asInstanceOf[T0]: T0

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  6. def clone(): AnyRef

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  7. final def eq(arg0: AnyRef): Boolean

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  8. def equals(arg0: Any): Boolean

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  9. def finalize(): Unit

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  10. final def getClass(): Class[_]

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  11. def hashCode(): Int

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  12. final def isInstanceOf[T0]: Boolean

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  13. final def ne(arg0: AnyRef): Boolean

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  14. final def notify(): Unit

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  15. final def notifyAll(): Unit

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  16. final def synchronized[T0](arg0: ⇒ T0): T0

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  17. def toString(): String

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  18. final def wait(): Unit

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  19. final def wait(arg0: Long, arg1: Int): Unit

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  20. final def wait(arg0: Long): Unit

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Inherited from Serializable

Inherited from Serializable

Inherited from InFormatterCompanion[Sequence, Sequence, SequenceDataset, FASTAInFormatter]

Inherited from AnyRef

Inherited from Any

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