ADAMContext

Value Members

1. final def !=(arg0: AnyRef): Boolean

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2. final def !=(arg0: Any): Boolean

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3. final def ##(): Int

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4. final def ==(arg0: AnyRef): Boolean

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5. final def ==(arg0: Any): Boolean

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6. final def asInstanceOf[T0]: T0

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7. def clone(): AnyRef

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8. implicit def convertBaseFeatureRDDToFeatureRDD(rdd: RDD[Feature]): FeatureRDDFunctions

9. final def eq(arg0: AnyRef): Boolean

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10. def equals(arg0: Any): Boolean

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11. def finalize(): Unit

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12. final def getClass(): Class[_]

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13. def hashCode(): Int

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14. implicit def intListToJavaIntegerList(list: List[Int]): List[Integer]

15. final def isInstanceOf[T0]: Boolean

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16. implicit def iterableToJavaCollection[A](i: Iterable[A]): Collection[A]

17. implicit def javaListToList[A](list: List[A]): List[A]

18. implicit def javaMapToMap[A, B](map: Map[A, B]): Map[A, B]

19. implicit def javaSetToSet[A](set: Set[A]): Set[A]

20. implicit def listToJavaList[A](list: List[A]): List[A]

21. implicit def mapToJavaMap[A, B](map: Map[A, B]): Map[A, B]

22. final def ne(arg0: AnyRef): Boolean

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23. final def notify(): Unit

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24. final def notifyAll(): Unit

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25. implicit def rddToADAMGenotypeRDD(rdd: RDD[Genotype]): GenotypeRDDFunctions

26. implicit def rddToADAMRDD[T](rdd: RDD[T])(implicit ev1: (T) ⇒ IndexedRecord, ev2: Manifest[T]): ADAMRDDFunctions[T]

27. implicit def rddToADAMRecordRDD(rdd: RDD[AlignmentRecord]): AlignmentRecordRDDFunctions

28. implicit def rddToContigFragmentRDD(rdd: RDD[NucleotideContigFragment]): NucleotideContigFragmentRDDFunctions

29. implicit def rddToFragmentRDD(rdd: RDD[Fragment]): FragmentRDDFunctions

30. implicit def rddToVariantContextRDD(rdd: RDD[VariantContext]): VariantContextRDDFunctions

31. implicit def recordToRichRecord(record: AlignmentRecord): RichAlignmentRecord

32. implicit def setToJavaSet[A](set: Set[A]): Set[A]

33. implicit def sparkContextToADAMContext(sc: SparkContext): ADAMContext

34. final def synchronized[T0](arg0: ⇒ T0): T0

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35. def toString(): String

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36. final def wait(): Unit

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37. final def wait(arg0: Long, arg1: Int): Unit

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38. final def wait(arg0: Long): Unit

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