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UnalignedReadRDD
case class
UnalignedReadRDD
(
rdd:
RDD
[
AlignmentRecord
]
,
recordGroups:
RecordGroupDictionary
)
extends
AlignmentRecordRDD
with
Unaligned
with
Product
with
Serializable
Linear Supertypes
Serializable
,
Serializable
,
Product
,
Equals
,
Unaligned
,
AlignmentRecordRDD
,
GenomicRDD
[
AlignmentRecord
],
AnyRef
,
Any
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UnalignedReadRDD
Serializable
Serializable
Product
Equals
Unaligned
AlignmentRecordRDD
GenomicRDD
AnyRef
Any
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Public
All
Instance Constructors
new
UnalignedReadRDD
(
rdd:
RDD
[
AlignmentRecord
]
,
recordGroups:
RecordGroupDictionary
)
Value Members
final
def
!=
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
AnyRef
final
def
!=
(
arg0:
Any
)
:
Boolean
Definition Classes
Any
final
def
##
()
:
Int
Definition Classes
AnyRef → Any
final
def
==
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
AnyRef
final
def
==
(
arg0:
Any
)
:
Boolean
Definition Classes
Any
final
def
asInstanceOf
[
T0
]
:
T0
Definition Classes
Any
def
clone
()
:
AnyRef
Attributes
protected[
java.lang
]
Definition Classes
AnyRef
Annotations
@throws
(
...
)
final
def
eq
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
AnyRef
def
finalize
()
:
Unit
Attributes
protected[
java.lang
]
Definition Classes
AnyRef
Annotations
@throws
(
classOf[java.lang.Throwable]
)
final
def
getClass
()
:
Class
[_]
Definition Classes
AnyRef → Any
final
def
isInstanceOf
[
T0
]
:
Boolean
Definition Classes
Any
final
def
ne
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
AnyRef
final
def
notify
()
:
Unit
Definition Classes
AnyRef
final
def
notifyAll
()
:
Unit
Definition Classes
AnyRef
val
rdd
:
RDD
[
AlignmentRecord
]
Definition Classes
UnalignedReadRDD
→
GenomicRDD
val
recordGroups
:
RecordGroupDictionary
Definition Classes
UnalignedReadRDD
→
AlignmentRecordRDD
val
sequences
:
SequenceDictionary
Definition Classes
Unaligned
final
def
synchronized
[
T0
]
(
arg0: ⇒
T0
)
:
T0
Definition Classes
AnyRef
final
def
wait
()
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
,
arg1:
Int
)
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
)
:
Unit
Definition Classes
AnyRef
Annotations
@throws
(
...
)
Inherited from
Serializable
Inherited from
Serializable
Inherited from
Product
Inherited from
Equals
Inherited from
Unaligned
Inherited from
AlignmentRecordRDD
Inherited from
GenomicRDD
[
AlignmentRecord
]
Inherited from
AnyRef
Inherited from
Any
Ungrouped