Java friendly apply method that wraps null strings.
Java friendly apply method that wraps null strings.
The name of the contig.
The length of the contig.
If available, the MD5 checksum for the contig.
If available, the URL the contig is accessible from.
If available, the REFSEQ ID for the contig.
If available, the Genbank ID for the contig.
If available, the assembly name for the assembly this contig is from.
If available, the species this contig was assembled from.
If available, the number of this contig in a set of contigs.
Returns a new SequenceRecord where all strings except for name are wrapped in Options to check for null values.
Builds a sequence record from an Avro Contig.
Builds a sequence record from an Avro Contig.
Contig record to build from.
This Contig record as a SequenceRecord.
Extracts the contig metadata from a nucleotide fragment.
Extracts the contig metadata from a nucleotide fragment.
The assembly fragment to extract a SequenceRecord from.
The sequence record metadata from a single assembly fragment.
Companion object for creating Sequence Records.