Wrapper for Hadoop-BAM to work around requirement for no-args constructor.
Wrapper for Hadoop-BAM to work around requirement for no-args constructor.
An RDD containing genotypes called in a set of samples against a given reference genome.
OutFormatter that reads streaming VCF.
An RDD containing VariantContexts attached to a reference and samples.
An RDD containing variants called against a given reference genome.
InFormatter companion that builds a VCFInFormatter to write VCF to a pipe.