WRITE_ORIGINAL_QUALITIES
FragmentRDD
AlignmentRecordRDD
WRITE_SUFFIXES
FragmentRDD
AlignmentRecordRDD
WritableSerializer
serialization
WriteADAMRecord
Timers
WriteBAMRecord
Timers
WriteCRAMRecord
Timers
WriteSAMRecord
Timers
wDelete
SmithWatermanConstantGapScoring
wInsert
SmithWatermanConstantGapScoring
wMatch
SmithWatermanConstantGapScoring
wMismatch
SmithWatermanConstantGapScoring
write
ReferencePositionSerializer
ReferenceRegionSerializer
VariantContextSerializer
InFormatter
BEDInFormatter
GFF3InFormatter
GTFInFormatter
NarrowPeakInFormatter
InterleavedFASTQInFormatter
Tab5InFormatter
Tab6InFormatter
AnySAMInFormatter
FASTQInFormatter
ReferencePositionPairSerializer
SingleReadBucketSerializer
VCFInFormatter
AvroSerializer
WritableSerializer
ReferenceContigMapSerializer
TwoBitFileSerializer
writeArray
SingleReadBucketSerializer
writeTextRdd
GenomicRDD
TextRddWriter
writer
AvroSerializer