org.bdgenomics.adam

converters

package converters

Visibility
  1. Public
  2. All

Type Members

  1. class AlignmentRecordConverter extends Serializable

    This class contains methods to convert AlignmentRecords to other formats.

  2. class VariantContextConverter extends Serializable with Logging

    This class converts VCF data to and from ADAM.

Value Members

  1. object DefaultHeaderLines

    Default set of VCF header lines for INFO and GT format fields supported in ADAM.

  2. object VariantContextConverter extends Serializable

    Object for converting between htsjdk and ADAM VariantContexts.

Ungrouped