org.bdgenomics.adam.rdd.read.recalibration

ObservationTable

class ObservationTable extends Serializable

Table containing the empirical frequency of mismatches for each set of covariate values.

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Instance Constructors

  1. new ObservationTable(space: CovariateSpace, entries: Map[CovariateKey, Observation])

Value Members

  1. final def !=(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

    Definition Classes
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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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    protected[java.lang]
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    @throws( ... )

  6. def csvHeader: Seq[String]

  7. val entries: Map[CovariateKey, Observation]

  8. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  9. def equals(arg0: Any): Boolean

    Definition Classes
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  10. def finalize(): Unit

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    protected[java.lang]
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    @throws( classOf[java.lang.Throwable] )

  11. final def getClass(): Class[_]

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  12. def hashCode(): Int

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  13. final def isInstanceOf[T0]: Boolean

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  14. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  15. final def notify(): Unit

    Definition Classes
    AnyRef

  16. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  17. val space: CovariateSpace

  18. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  19. def toCSV: String

  20. def toString(): String

    Definition Classes
    ObservationTable → AnyRef → Any

  21. final def wait(): Unit

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    @throws( ... )

  22. final def wait(arg0: Long, arg1: Int): Unit

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    @throws( ... )

  23. final def wait(arg0: Long): Unit

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Inherited from Serializable

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