Object/Class

org.bdgenomics.adam.rich

RichVariant

Related Docs: class RichVariant | package rich

Permalink

object RichVariant extends Serializable

Helper object for creating enriched variants.

Linear Supertypes
Serializable, Serializable, AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. RichVariant
  2. Serializable
  3. Serializable
  4. AnyRef
  5. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any
  5. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  6. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  7. def equals(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  8. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  9. def genotypeToRichVariant(genotype: Genotype): RichVariant

    Permalink

    Builds a rich variant from a genotype.

    Builds a rich variant from a genotype.

    genotype

    Genotype to extract variant from.

    returns

    Returns a rich variant representing the variant that was genotyped.

  10. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any
  11. def hashCode(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  12. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any
  13. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  14. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef
  15. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef
  16. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef
  17. def toString(): String

    Permalink
    Definition Classes
    AnyRef → Any
  18. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  19. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  20. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped