org.bdgenomics.utils.metrics

Histogram

class Histogram[T] extends Aggregated[T] with Serializable

Linear Supertypes
Aggregated[T], Serializable, Serializable, Writable, AnyRef, Any
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  1. Histogram
  2. Aggregated
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  4. Serializable
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Instance Constructors

  1. new Histogram(valueToCount: Map[T, Int])

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. def +(value: T): Histogram[T]

  5. def ++(other: Histogram[T]): Histogram[T]

  6. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  7. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  8. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  9. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  10. def count(): Long

    Counts the total number of elements that went into the histogram

    Counts the total number of elements that went into the histogram

    returns

    Definition Classes
    Histogram → Aggregated

  11. def countIdentical(): Long

    Definition Classes
    Histogram → Aggregated

  12. def countSubset(f: (Any) ⇒ Boolean): Long

    Counts the number of values in the Histogram whose keys pass the given predicate function, f.

    Counts the number of values in the Histogram whose keys pass the given predicate function, f.

    f

    Only those keys k for which f(k) == true will be counted.

    returns

    The sum of the values passed by the predicate.

  13. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  14. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  15. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  16. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  17. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  18. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  19. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  20. final def notify(): Unit

    Definition Classes
    AnyRef

  21. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  22. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  23. def toString(): String

    Definition Classes
    Histogram → AnyRef → Any

  24. val valueToCount: Map[T, Int]

  25. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  26. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  27. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  28. def write(stream: Writer): Unit

    Definition Classes
    Histogram → Writable

Inherited from Aggregated[T]

Inherited from Serializable

Inherited from Serializable

Inherited from Writable

Inherited from AnyRef

Inherited from Any

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