Class

org.biodatageeks.alignment.partitioners.ReadInputFormat

ReadRecordReader

Related Doc: package ReadInputFormat

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abstract class ReadRecordReader[X] extends RecordReader[Text, X]

Linear Supertypes
RecordReader[Text, X], Closeable, AutoCloseable, AnyRef, Any
Known Subclasses
FastaReadRecordReader, FastqReadRecordReader, InterleavedFastqReadRecordReader
Ordering
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  2. By Inheritance
Inherited
  1. ReadRecordReader
  2. RecordReader
  3. Closeable
  4. AutoCloseable
  5. AnyRef
  6. Any
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new ReadRecordReader(conf: Configuration, split: FileSplit)

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Abstract Value Members

  1. abstract def getCurrentValue(): X

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    Definition Classes
    RecordReader
    Annotations
    @throws( ... ) @throws( classOf[java.io.IOException] )

  2. abstract def isFirstRecordNameLine(bytesRead: Int, buffer: Text, reader: LineReader, stream: FSDataInputStream): Boolean

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    Attributes
    protected

  3. abstract def isFirstRecordValid(reader: LineReader, stream: FSDataInputStream): Boolean

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    Attributes
    protected

  4. abstract def setValidRead(key: Text, value: X): Unit

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    Attributes
    protected

Concrete Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  5. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  6. def close(): Unit

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    Definition Classes
    ReadRecordReader → RecordReader → Closeable → AutoCloseable

  7. val codec: CompressionCodec

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  8. val codecFactory: CompressionCodecFactory

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  9. val conf: Configuration

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  10. var currentValue: X

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    Attributes
    protected

  11. var end: Long

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    Attributes
    protected

  12. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  13. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  14. val file: Path

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    Attributes
    protected

  15. val fileIn: FSDataInputStream

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  16. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  17. val fs: FileSystem

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  18. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  19. def getCurrentKey(): Text

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    Definition Classes
    ReadRecordReader → RecordReader

  20. def getProgress(): Float

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    Definition Classes
    ReadRecordReader → RecordReader

  21. def hashCode(): Int

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    Definition Classes
    AnyRef → Any

  22. def initialize(split: InputSplit, context: TaskAttemptContext): Unit

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    Definition Classes
    ReadRecordReader → RecordReader

  23. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  24. var lineReader: LineReader

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    Attributes
    protected

  25. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  26. def nextKeyValue(): Boolean

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    Definition Classes
    ReadRecordReader → RecordReader

  27. final def notify(): Unit

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    Definition Classes
    AnyRef

  28. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  29. var pos: Long

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    Attributes
    protected

  30. val split: FileSplit

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  31. var start: Long

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    Attributes
    protected

  32. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  33. def toString(): String

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    Definition Classes
    AnyRef → Any

  34. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  35. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  36. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from RecordReader[Text, X]

Inherited from Closeable

Inherited from AutoCloseable

Inherited from AnyRef

Inherited from Any

Ungrouped