Object

org.biodatageeks.alignment.partitioners

ReadReader

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object ReadReader

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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final val FASTA_NAME_PREFIX_CHAR: Char('>')

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  5. final val FASTQ_NAME_PREFIX_CHAR: Char('@')

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  6. final val MAX_LINE_LENGTH: Int(20000)

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  7. final val SEPARATOR_CHAR: Char('+')

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  8. final def asInstanceOf[T0]: T0

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  9. def clone(): AnyRef

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  10. final def eq(arg0: AnyRef): Boolean

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  11. def equals(arg0: Any): Boolean

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  12. def finalize(): Unit

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  13. final def getClass(): Class[_]

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  14. def hashCode(): Int

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  15. def isFastqRecordValid(reader: LineReader, remainingFileSize: Long): Boolean

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  16. final def isInstanceOf[T0]: Boolean

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  17. final def ne(arg0: AnyRef): Boolean

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  18. final def notify(): Unit

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  19. final def notifyAll(): Unit

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  20. def setFastaReadAndReturnReadBytes(lineReader: LineReader, key: Text, value: FastaRead, fileName: String): Int

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  21. def setFastqReadAndReturnReadBytes(lineReader: LineReader, key: Text, value: FastqRead, fileName: String): Int

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  22. final def synchronized[T0](arg0: ⇒ T0): T0

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  23. def toString(): String

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  24. final def wait(): Unit

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  25. final def wait(arg0: Long, arg1: Int): Unit

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  26. final def wait(arg0: Long): Unit

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