Object

org.biodatageeks.alignment

Constants

Related Doc: package alignment

Permalink

object Constants

Linear Supertypes
AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. Constants
  2. AnyRef
  3. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  4. final val FIRST_SEGMENT_FLAG: Int(64)

    Permalink
  5. final val LAST_SEGMENT_FLAG: Int(128)

    Permalink
  6. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any
  7. val bowtie2ToolName: String

    Permalink
  8. val bowtieToolName: String

    Permalink
  9. val bwaToolName: String

    Permalink
  10. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  11. val defaultBWAImage: String

    Permalink
  12. val defaultBowtie2Image: String

    Permalink
  13. val defaultBowtieImage: String

    Permalink
  14. val defaultGem3Image: String

    Permalink
  15. val defaultMagicBlastImage: String

    Permalink
  16. val defaultMinimap2Image: String

    Permalink
  17. final val defaultRG: String("SM:Pool1")

    Permalink
  18. final val defaultRGId: String("test_id")

    Permalink
  19. val defaultSnapImage: String

    Permalink
  20. val defaultStarImage: String

    Permalink
  21. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  22. def equals(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  23. val faExtensions: List[String]

    Permalink
  24. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  25. val fqExtensions: List[String]

    Permalink
  26. val gem3ToolName: String

    Permalink
  27. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any
  28. def hashCode(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  29. val ifqExtensions: List[String]

    Permalink
  30. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any
  31. val magicBlastToolName: String

    Permalink
  32. val minimap2ToolName: String

    Permalink
  33. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  34. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef
  35. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef
  36. val snapToolName: String

    Permalink
  37. val starToolName: String

    Permalink
  38. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef
  39. def toString(): String

    Permalink
    Definition Classes
    AnyRef → Any
  40. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  41. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  42. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from AnyRef

Inherited from Any

Ungrouped