Our own BIO NER trained on the BioCreative 2 dataset, using the Stanford CRF User: mihais Date: 2/27/15 Last Modified: Fix compiler issue: import scala.io.Source.
Combines RuleNER and CRFNER into a, surprise surprise, hybrid NER User: mihais Date: 2/9/17
This is used in bioresources to format the data into a format that is easy to load at runtime User: mihais Date: 2/7/16 Last Modified: Fix compiler issue: import scala.io.Source.
Loads the KBs from bioresources under org/clulab/reach/kb/ner These must be generated offline by KBGenerator; see bioresources/ner_kb.sh User: mihais.
Loads the KBs from bioresources under org/clulab/reach/kb/ner These must be generated offline by KBGenerator; see bioresources/ner_kb.sh User: mihais. 2/7/16. Last Modified: Update to use external configuration file.