1. org
   1. org.clulab
      1. org.clulab.dynet
         1. (case class)AnnotatedSentence
         2. (object)
            ArrayMath
         3. (object)
            CnnExample
         4. (object)(class)CoNLLSRLToMetal
         5. (object)
            CoNLLUToMetal
         6. (object)
            CoNLLYToMetal
         7. (case class)ConstEmbeddingParameters
         8. (object)(class)ConstEmbeddingsGlove
         9. (object)(class)EmbeddingLayer
         10. (trait)FinalLayer
         11. (object)(class)ForwardLayer
         12. (object)(class)GreedyForwardLayer
         13. (trait)InitialLayer
         14. (trait)IntermediateLayer
         15. (object)(class)Layers
         16. (object)(class)Metal
         17. (object)(class)MetalRowReader
         18. (class)MetalShell
         19. (object)
             ModelAveraging
         20. (object)
             ModelDiff
         21. (object)(class)RnnLayer
         22. (trait)RowReader
         23. (object)(class)SafeTrainer
         24. (trait)Saveable
         25. (case class)ScoreCounts
         26. (class)ScoreCountsByLabel
         27. (class)SentenceIterator
         28. (object)
             SeqScorer
         29. (case class)Shard
         30. (class)Task
         31. (object)(class)TaskManager
         32. (object)(class)Utils
         33. (object)(class)ViterbiForwardLayer
      2. org.clulab.embeddings
         1. (object)(class)CompactWordEmbeddingMap
         2. (object)
            CompactWordEmbeddingMapApp
         3. (object)
            CullVectors
         4. (class)DefaultWordSanitizer
         5. (object)
            EmbeddingUtils
         6. (object)(class)ExplicitWordEmbeddingMap
         7. (object)(class)LemmatizeEmbeddings
         8. (object)(class)SanitizedWordEmbeddingMap
         9. (object)(trait)WordEmbeddingMap
         10. (object)
             WordEmbeddingMapPool
         11. (trait)WordSanitizing
      3. org.clulab.learning
         1. (class)Answer
         2. (object)(class)BaggingClassifier
         3. (class)BVFDataset
         4. (class)BVFDatum
         5. (class)BVFRankingDataset
         6. (class)BVFRegDataset
         7. (trait)Classifier
         8. (class)CounterDataset
         9. (class)CounterRegDataset
         10. (class)Dataset
         11. (class)DatasetFold
         12. (object)(class)Datasets
         13. (trait)Datum
         14. (object)
             EpsilonSVR
         15. (trait)FeatureTraversable
         16. (trait)FeatureUpdater
         17. (class)InformationGain
         18. (class)KernelType
         19. (class)L1LinearSVMClassifier
         20. (class)L1LinearSVMRegression
         21. (class)L1LogisticRegressionClassifier
         22. (object)
             LearningExample
         23. (object)(class)LiblinearClassifier
         24. (object)(class)LiblinearRegression
         25. (object)(class)LibSVMClassifier
         26. (class)LibSvmEpsilonRegression
         27. (class)LibSvmNuRegression
         28. (object)(class)LibSvmRegression
         29. (object)
             LinearKernel
         30. (class)LinearSVMClassifier
         31. (class)LinearSVMRegression
         32. (class)LinearSVMRegressionDual
         33. (class)LogisticRegressionClassifier
         34. (object)
             NuSVR
         35. (object)(class)PerceptronClassifier
         36. (object)(class)PerceptronRankingClassifier
         37. (object)
             PolynomialKernel
         38. (class)Qid
         39. (object)
             RankerEvaluator
         40. (object)(trait)RankingClassifier
         41. (trait)RankingDataset
         42. (object)
             RBFKernel
         43. (class)RegDataset
         44. (trait)Regression
         45. (object)(class)RFClassifier
         46. (class)RFJob
         47. (class)RFLeaf
         48. (class)RFNonTerminal
         49. (trait)RFTree
         50. (object)(class)RVFDataset
         51. (class)RVFDatum
         52. (class)RVFKDatum
         53. (class)RVFKRankingDataset
         54. (object)(class)RVFRankingDataset
         55. (object)(class)RVFRegDataset
         56. (object)(class)ScaleRange
         57. (object)
             SigmoidKernel
         58. (object)(class)SVMRankingClassifier
         59. (class)SvmType
         60. (case class)Utility
      4. org.clulab.odin
         1. (class)Actions
         2. (trait)Attachment
         3. (class)CrossSentenceMention
         4. (class)EventMention
         5. (object)(class)ExtractorEngine
         6. (trait)Mention
         7. (class)RelationMention
         8. (object)(class)State
         9. (class)TextBoundMention
         1. org.clulab.odin.impl
            1. (class)ActionMirror
            2. (class)Addition
            3. (class)ArgumentPattern
            4. (trait)ArgumentQuantifier
            5. (class)ChunkConstraint
            6. (class)ConcatGraphPattern
            7. (class)ConjunctiveConstraint
            8. (class)Constant
            9. (class)CrossSentenceExtractor
            10. (class)DisjunctiveConstraint
            11. (class)DisjunctiveGraphPattern
            12. (class)Division
            13. (object)
                Done
            14. (class)EmbeddingsResource
            15. (class)EntityConstraint
            16. (class)Equal
            17. (class)EuclideanQuotient
            18. (class)EuclideanRemainder
            19. (case class)ExactPriority
            20. (case class)ExactQuantifier
            21. (class)ExactStringMatcher
            22. (trait)Extractor
            23. (trait)Graph
            24. (class)GraphExtractor
            25. (trait)GraphPattern
            26. (class)GraphPatternCompiler
            27. (trait)GraphPatternNode
            28. (class)GreaterThan
            29. (class)GreaterThanOrEqual
            30. (class)IncomingConstraint
            31. (class)IncomingGraphPattern
            32. (object)
                IncomingWildcard
            33. (trait)Inst
            34. (case class)IntervalPriority
            35. (class)KleeneGraphPattern
            36. (class)LemmaConstraint
            37. (class)LessThan
            38. (class)LessThanOrEqual
            39. (class)LookaroundGraphPattern
            40. (case class)LowerBoundPriority
            41. (object)
                MarkdownGeneration
            42. (case class)MatchLookAhead
            43. (case class)MatchLookBehind
            44. (case class)MatchMention
            45. (case class)MatchSentenceEnd
            46. (case class)MatchSentenceStart
            47. (case class)MatchToken
            48. (class)MentionConstraint
            49. (class)Multiplication
            50. (class)NegatedConstraint
            51. (class)NegativeExpression
            52. (class)NormConstraint
            53. (class)NotEqual
            54. (object)
                NullQuantifier
            55. (trait)NumericExpression
            56. (object)(class)OdinCompileException
            57. (object)(case class)OdinConfig
            58. (object)(class)OdinException
            59. (object)(class)OdinNamedCompileException
            60. (trait)OdinResource
            61. (object)(class)OdinResourceManager
            62. (class)OptionalGraphPattern
            63. (class)OutgoingConstraint
            64. (class)OutgoingGraphPattern
            65. (object)
                OutgoingWildcard
            66. (case class)Pass
            67. (object)(trait)Priority
            68. (object)(class)ProgramFragment
            69. (case class)RangedQuantifier
            70. (class)RegexStringMatcher
            71. (class)RelationGraphPattern
            72. (object)(class)RuleReader
            73. (case class)SaveEnd
            74. (case class)SaveStart
            75. (class)SimilarityConstraint
            76. (case class)SparsePriority
            77. (case class)Split
            78. (trait)StringMatcher
            79. (trait)StringMatcherParsers
            80. (class)Subtraction
            81. (class)TagConstraint
            82. (object)(class)Taxonomy
            83. (object)
                ThompsonVM
            84. (trait)TokenConstraint
            85. (class)TokenConstraintGraphPattern
            86. (trait)TokenConstraintParsers
            87. (class)TokenExtractor
            88. (object)(class)TokenPattern
            89. (class)TokenPatternParsers
            90. (object)
                TokenWildcard
            91. (class)TriggerMentionGraphPattern
            92. (class)TriggerPatternGraphPattern
            93. (trait)Values
            94. (class)WordConstraint
         2. org.clulab.odin.serialization
            1. org.clulab.odin.serialization.json
               1. (object)
                  CrossSentenceMention
               2. (class)CrossSentenceMentionOps
               3. (object)
                  EventMention
               4. (class)EventMentionOps
               5. (object)
                  JSONSerializer
               6. (class)MentionOps
               7. (class)MentionSeq
               8. (class)OdinPathOps
               9. (object)
                  RelationMention
               10. (class)RelationMentionOps
               11. (object)
                   TextBoundMention
               12. (class)TextBoundMentionOps
      5. org.clulab.processors
         1. (object)(class)Document
         2. (trait)DocumentAble
         3. (trait)DocumentAttachment
         4. (trait)DocumentAttachmentBuilderFromJson
         5. (trait)DocumentAttachmentBuilderFromText
         6. (trait)DocumentSerializerAble
         7. (class)IntermediateDocumentAttachment
         8. (trait)JsonSerializerAble
         9. (class)ObjectDocumentAttachmentBuilderFromJson
         10. (class)ObjectDocumentAttachmentBuilderFromText
         11. (object)(trait)Processor
         12. (object)(class)Sentence
         1. org.clulab.processors.clu
            1. (object)(class)CluProcessor
            2. (object)(class)CluShell
            3. (case class)EmbeddingsAttachment
            4. (object)(class)GivenConstEmbeddingsAttachment
            5. (class)PortugueseCluProcessor
            6. (trait)SentencePostProcessor
            7. (class)SpanishCluProcessor
            1. org.clulab.processors.clu.tokenizer
               1. (object)(class)EnglishLemmatizer
               2. (class)EnglishSentenceSplitter
               3. (trait)Lemmatizer
               4. (class)OpenDomainEnglishLexer
               5. (class)OpenDomainEnglishTokenizer
               6. (class)OpenDomainLexer
               7. (class)OpenDomainPortugueseLexer
               8. (class)OpenDomainPortugueseTokenizer
               9. (class)OpenDomainPortugueseTokenizerLexer
               10. (class)OpenDomainSpanishLexer
               11. (class)OpenDomainSpanishTokenizer
               12. (class)OpenDomainSpanishTokenizerLexer
               13. (class)PortugueseLemmatizer
               14. (class)PortugueseSentenceSplitter
               15. (object)(case class)RawToken
               16. (class)RuleBasedSentenceSplitter
               17. (object)(trait)SentenceSplitter
               18. (class)SpanishLemmatizer
               19. (class)SpanishSentenceSplitter
               20. (class)Tokenizer
               21. (trait)TokenizerLexer
               22. (trait)TokenizerStep
               23. (class)TokenizerStepAccentedNormalization
               24. (class)TokenizerStepContractions
               25. (object)(class)TokenizerStepNormalization
               26. (class)TokenizerStepPortugueseContractions
               27. (class)TokenizerStepSpanishContractions
      6. org.clulab.sentiment
         1. (object)(class)LexiconSentimentAnalyzer
         2. (case class)TextStats
      7. org.clulab.sequences
         1. (class)BiMEMMSequenceTagger
         2. (trait)BuildState
         3. (object)
            CaseDetector
         4. (object)
            ColumnReader
         5. (object)(class)ColumnsToDocument
         6. (object)(class)CombinedLexiconNER
         7. (object)(class)CompactLexiconNER
         8. (object)(class)CompactTrie
         9. (class)FastBuildState
         10. (class)FastLexiconNERBuilder
         11. (object)(class)FeatureExtractor
         12. (trait)KbSource
         13. (trait)LexicalVariations
         14. (object)(class)LexiconNER
         15. (class)LexiconNERBuilder
         16. (object)(class)LexiconNERShell
         17. (class)MEMMSequenceTagger
         18. (class)MemoryOverrideKbSource
         19. (class)MemoryStandardKbSource
         20. (class)NoLexicalVariations
         21. (object)
             NormalizeParens
         22. (class)OverrideKbSource
         23. (trait)ResourceKbSource
         24. (class)ResourceOverrideKbSource
         25. (class)ResourceStandardKbSource
         26. (case class)Row
         27. (class)SeparatedLexiconNER
         28. (class)SeqScorer
         29. (trait)SequenceTagger
         30. (object)(class)SequenceTaggerEvaluator
         31. (object)
             SequenceTaggerLoader
         32. (object)(class)SequenceTaggerLogger
         33. (object)
             SequenceTaggerShell
         34. (class)SlowBuildState
         35. (class)SlowLexiconNERBuilder
         36. (class)SpanAndIndex
         37. (class)StandardKbSource
         38. (trait)Tagger
      8. org.clulab.serialization
         1. (object)(class)DocumentSerializer
         1. org.clulab.serialization.json
            1. (class)ArrayOps
            2. (class)DirectedGraphOps
            3. (class)DocOps
            4. (class)EdgeOps
            5. (trait)Equivalency
            6. (class)GraphMapOps
            7. (trait)JSONSerialization
            8. (object)
               JSONSerializer
            9. (class)ODirectedGraphOps
            10. (class)SentenceOps
      9. org.clulab.struct
         1. (class)BooleanHashTrie
         2. (object)(case class)BooleanTrieNode
         3. (object)(case class)CorefChains
         4. (case class)CorefMention
         5. (object)(class)Counter
         6. (object)
            Counters
         7. (class)DebugBooleanHashTrie
         8. (object)(class)DependencyMap
         9. (object)(case class)DirectedGraph
         10. (class)DirectedGraphEdgeIterator
         11. (object)(class)DirectedGraphIndex
         12. (case class)Edge
         13. (object)(trait)EntityValidator
         14. (object)(class)GraphMap
         15. (class)HashTrie
         16. (class)Internalizer
         17. (object)(class)Interval
         18. (class)IntHashTrie
         19. (object)(case class)IntTrieNode
         20. (object)(class)Lexicon
         21. (class)MutableNumber
         22. (case class)NonTerminal
         23. (case class)RelationTriple
         24. (case class)Terminal
         25. (object)(trait)Tree
         26. (class)TrueEntityValidator
      10. org.clulab.utils
          1. (trait)BeforeAndAfter
          2. (class)ClassLoaderObjectInputStream
          3. (class)CliReader
          4. (object)
             Closer
          5. (trait)Configured
          6. (object)(class)ConfigWithDefaults
          7. (object)
             CoNLLtoSentencePerLine
          8. (class)DefaultMenuItem
          9. (object)
             DependencyUtils
          10. (class)DependencyUtilsException
          11. (object)(class)EvaluationStatistics
          12. (class)ExitMenuItem
          13. (object)
              Files
          14. (object)
              FileUtils
          15. (class)HelpMenuItem
          16. (class)IdeReader
          17. (object)(class)InputStreamer
          18. (class)LineReader
          19. (trait)Logging
          20. (class)MainMenuItem
          21. (object)
              MathUtils
          22. (class)Menu
          23. (object)(class)MenuItem
          24. (object)
              Profiler
          25. (class)RangeOdometer
          26. (object)(class)ScienceUtils
          27. (class)SeqOdometer
          28. (object)
              SeqUtils
          29. (object)
              Serializer
          30. (class)Shell
          31. (class)Sink
          32. (object)
              Sinker
          33. (object)
              Sourcer
          34. (object)
              StringUtils
          35. (object)
              ThreadUtils
          36. (object)(class)Timer
          37. (object)
              Timers
          38. (object)
              ToEnhancedDependencies
          39. (object)
              ToEnhancedSemanticRoles
2. uk
   1. uk.ac
      1. uk.ac.susx
         1. uk.ac.susx.informatics
            1. (class)Morpha