I
ComplexEvent
Event
SimpleEvent
IDPointer
assembly
IDed
FriesOutput
IGNORE_SECTIONS
NxmlIndexer
IMKBFamilyLookup
grounding
IMKBFamilyMentionLookup
grounding
IMKBLookup
grounding
IMKBMentionLookup
grounding
IMKBMetaInfo
grounding
IMKBOrganCellTypeLookup
grounding
IMKBOrganCellTypeMentionLookup
grounding
IMKBProteinLookup
grounding
IMKBProteinMentionLookup
grounding
IdTracker
brat
InMemoryKB
grounding
IncrementingCounter
export
grounding
IncrementingId
export
IndexCardOutput
indexcards
id
AssemblyAnnotation
Annotation
BinaryAttribute
Equivalence
Event
MultiValueAttribute
Normalization
Relation
TextBound
XrefUtils
KBEntry
KBResolution
ContextGrounding
identityLink
Links
ignoreSections
PaperReader
ReachCLI
Api
ApiRuler
index
NxmlIndexer
indexCardOutputter
ApiRuler
indexDir
NxmlSearcher
indexcards
export
indexer
nxml
infer
ContextEngine
DummyContextEngine
RuleBasedContextEngine
inferContext
BidirectionalPaddingContext
BoundedPaddingContext
FillingContext
RuleBasedContextEngine
inferedLatentSparseMatrix
RuleBasedContextEngine
input
Row
SimpleEvent
ConversionUtils
inputHash
SimpleEvent
inputPointers
SimpleEvent
instances
Corpus
interactions
Fragmenter
intersection
NxmlSearcher
involvesCoreference
AssemblyManager
inward
extern
isBinding
Labeler
isClosedClass
Anaphoric
CorefEventMention
CorefRelationMention
CorefTextBoundMention
isComplete
Anaphoric
CorefEventMention
CorefRelationMention
CorefTextBoundMention
isContextMention
ContextEngine
isCrossSentence
TrainingInstance
isDephosphorylation
Labeler
isDirect
BioEventMention
isEquivalentTo
PrecedenceRelation
Complex
ComplexEvent
EntityEventRepresentation
SimpleEntity
SimpleEvent
isEvent
SieveUtils
isEventMention
MentionManager
isEventSite
MentionManager
isFamilyGrounded
ReachKBUtils
isGZFile
FileReader
isGeneric
Anaphoric
CorefEventMention
CorefRelationMention
CorefTextBoundMention
Mutant
isGenericNounPhrase
Anaphoric
CorefEventMention
CorefRelationMention
CorefTextBoundMention
isGrounded
Grounding
isHumanSpecies
Speciated
isHypothesis
MentionManager
isHypothesized
MentionManager
isMemberOf
Speciated
isModified
Modifications
isMutated
MentionManager
isMutation
MentionManager
isNegated
MentionManager
isNegation
MentionManager
isNoSpeciesValue
KBEntry
isPhosphorylation
Labeler
isProteinDomain
ReachKBKeyTransforms
isProteinGrounded
ReachKBUtils
isTitle
FriesEntry
NxmlEntry
isTransport
Labeler
isValidMITREMention
AssemblyExporter
isValidMention
AssemblyManager
isValidRegulation
AssemblyExporter
isValidRelationPair
Constraints