Object

org.bdgenomics.adam.projections

VariantCallingAnnotationsField

Related Doc: package projections

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object VariantCallingAnnotationsField extends FieldEnumeration

Enumeration of VariantCallingAnnotations field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. VariantCallingAnnotationsField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Visibility
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Type Members

  1. class SchemaVal extends Val with FieldValue

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    An enumerated field that is part of this schema.

    An enumerated field that is part of this schema.

    Definition Classes
    FieldEnumeration

  2. class Val extends Value with Serializable

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    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()

  3. abstract class Value extends Ordered[Value] with Serializable

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    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()

  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

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    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. final def SchemaValue: SchemaVal

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    Attributes
    protected
    Definition Classes
    FieldEnumeration

  5. final def Value(i: Int, name: String): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  6. final def Value(name: String): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  7. final def Value(i: Int): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  8. final def Value: Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  9. final def apply(x: Int): Value

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    Definition Classes
    Enumeration

  10. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  11. val attributes: SchemaVal

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  12. val baseQRankSum: SchemaVal

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  13. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  14. val culprit: SchemaVal

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  15. val downsampled: SchemaVal

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  16. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  17. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  18. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  19. val fisherStrandBiasPValue: SchemaVal

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  20. val genotypePriors: SchemaVal

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  21. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  22. def hashCode(): Int

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    Definition Classes
    AnyRef → Any

  23. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  24. val mapq0Reads: SchemaVal

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  25. final def maxId: Int

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    Definition Classes
    Enumeration

  26. val mqRankSum: SchemaVal

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  27. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  28. var nextId: Int

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    Attributes
    protected
    Definition Classes
    Enumeration

  29. var nextName: Iterator[String]

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    Attributes
    protected
    Definition Classes
    Enumeration

  30. final def notify(): Unit

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    Definition Classes
    AnyRef

  31. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  32. val readPositionRankSum: SchemaVal

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  33. def readResolve(): AnyRef

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    Attributes
    protected
    Definition Classes
    Enumeration

  34. val recordSchema: Schema

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    The schema that this enumeration represents.

    The schema that this enumeration represents.

    Definition Classes
    FieldEnumeration

  35. val rmsMapQ: SchemaVal

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  36. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  37. def toString(): String

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    Definition Classes
    Enumeration → AnyRef → Any

  38. def values: ValueSet

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    Definition Classes
    Enumeration

  39. val variantFilters: SchemaVal

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  40. val vqslod: SchemaVal

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  41. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  42. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  43. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  44. final def withName(s: String): Value

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    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped