Object/Class

org.hammerlab.bam.check.full.error

Counts

Related Docs: class Counts | package error

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object Counts extends Serializable

Linear Supertypes
Serializable, Serializable, AnyRef, Any
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  1. Counts
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Type Members

  1. implicit final class CountsWrapper extends AnyVal

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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    Attributes
    protected[java.lang]
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    @throws( ... )

  6. final def eq(arg0: AnyRef): Boolean

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  7. def equals(arg0: Any): Boolean

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  8. def finalize(): Unit

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    Attributes
    protected[java.lang]
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    @throws( classOf[java.lang.Throwable] )

  9. val gen: Generic[Counts] { type Repr = shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[Long,shapeless.::[scala.collection.immutable.Map[Int,Long],shapeless.HNil]]]]]]]]]]]]]]]]]]]] }

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  10. final def getClass(): Class[_]

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  11. def hashCode(): Int

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  12. final def isInstanceOf[T0]: Boolean

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    Definition Classes
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  13. val lg: LabelledGeneric[Counts] { type Repr = shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooFewFixedBlockBytes")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("negativeReadIdx")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooLargeReadIdx")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("negativeReadPos")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooLargeReadPos")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("negativeNextReadIdx")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooLargeNextReadIdx")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("negativeNextReadPos")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooLargeNextReadPos")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooFewBytesForReadName")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("nonNullTerminatedReadName")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("nonASCIIReadName")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("noReadName")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("emptyReadName")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooFewBytesForCigarOps")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("invalidCigarOp")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("emptyMappedCigar")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("emptyMappedSeq")],Long],shapeless.::[Long with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("tooFewRemainingBytesImplied")],Long],shapeless.::[scala.collection.immutable.Map[Int,Long] with shapeless.labelled.KeyTag[Symbol with shapeless.tag.Tagged[String("readsBeforeError")],scala.collection.immutable.Map[Int,Long]],shapeless.HNil]]]]]]]]]]]]]]]]]]]] }

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    Can't instantiate these inside the CountsWrapper AnyVal below.

  14. object longFields extends FieldPoly

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  15. implicit def makeLines(wrapFields: Boolean = false, includeZeros: Boolean = true, hideTooFewFixedBlockBytes: Boolean = false)(implicit _indent: Indent): ToLines[Counts]

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    Pretty-print an Counts

  16. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
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  17. final def notify(): Unit

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    Definition Classes
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  18. final def notifyAll(): Unit

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  19. final def synchronized[T0](arg0: ⇒ T0): T0

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  20. def toString(): String

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  21. final def wait(): Unit

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    @throws( ... )

  22. final def wait(arg0: Long, arg1: Int): Unit

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    @throws( ... )

  23. final def wait(arg0: Long): Unit

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Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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