spark

Type Members

1. case class BAMRecordRDD(splits: Seq[Split], reads: RDD[SAMRecord]) extends Product with Serializable

   

2. case class NoReadFoundException(path: Path, start: Long, maxReadSize: MaxReadSize) extends Exception with Product with Serializable

   

3. sealed trait ParallelConfig extends AnyRef

   

   Wrapper around org.hammerlab.parallel.Config machinery that is easier to construct before having access to a SparkContext; exposed in org.hammerlab.bam.spark.load.CanLoadBam APIs.

4. case class Spark(partitioningStrategy: PartitioningStrategy = ElemsPerPartition(1)) extends ParallelConfig with Product with Serializable

   

5. case class Split(start: Pos, end: Pos) extends Product with Serializable

   

6. case class Threads(numThreads: Int = parallel.defaultNumThreads) extends ParallelConfig with Product with Serializable