org.hammerlab.genomics.loci

parsing

package parsing

Visibility
  1. Public
  2. All

Type Members

  1. case class LociRange(contigName: ContigName, start: Locus, endOpt: Option[Locus]) extends ParsedLociRange with Product with Serializable

  2. final case class LociRanges(ranges: Iterable[LociRange]) extends AnyVal with ParsedLoci with Product with Serializable

  3. sealed trait ParsedLoci extends Any

    Representation of genomic-loci ranges that may be used to instantiate a org.hammerlab.genomics.loci.set.LociSet.

  4. sealed trait ParsedLociRange extends AnyRef

    Representation of a genomic range as parsed from a cmdline-flag or file.

Value Members

  1. object All extends ParsedLoci with Product with Serializable

    Special ParsedLoci value representing all genomic loci.

  2. object AllRange extends ParsedLociRange with Product with Serializable

  3. object LociRange extends Serializable

  4. object LociRanges extends Serializable

  5. object ParsedLoci

  6. object ParsedLociRange

Ungrouped