Class

org.hammerlab.genomics.loci.iterator

MergeLociIterator

Related Doc: package iterator

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class MergeLociIterator[+T] extends SimpleBufferedIterator[(Locus, T)]

Linear Supertypes
SimpleBufferedIterator[(Locus, T)], BufferedIterator[(Locus, T)], Iterator[(Locus, T)], TraversableOnce[(Locus, T)], GenTraversableOnce[(Locus, T)], AnyRef, Any
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Inherited
  1. MergeLociIterator
  2. SimpleBufferedIterator
  3. BufferedIterator
  4. Iterator
  5. TraversableOnce
  6. GenTraversableOnce
  7. AnyRef
  8. Any
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Visibility
  1. Public
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Instance Constructors

  1. new MergeLociIterator(lociObjs1: BufferedIterator[(Locus, T)], lociObjs2: BufferedIterator[(Locus, T)])

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Type Members

  1. class GroupedIterator[B >: A] extends AbstractIterator[Seq[B]] with Iterator[Seq[B]]

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    Definition Classes
    Iterator

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. def ++[B >: (Locus, T)](that: ⇒ GenTraversableOnce[B]): Iterator[B]

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    Definition Classes
    Iterator
  4. def /:[B](z: B)(op: (B, (Locus, T)) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  5. def :\[B](z: B)(op: ((Locus, T), B) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  6. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  7. def _advance: Option[(Locus, T)]

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    Definition Classes
    MergeLociIterator → SimpleBufferedIterator
  8. def addString(b: StringBuilder): StringBuilder

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    Definition Classes
    TraversableOnce
  9. def addString(b: StringBuilder, sep: String): StringBuilder

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    Definition Classes
    TraversableOnce
  10. def addString(b: StringBuilder, start: String, sep: String, end: String): StringBuilder

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    Definition Classes
    TraversableOnce
  11. def aggregate[B](z: ⇒ B)(seqop: (B, (Locus, T)) ⇒ B, combop: (B, B) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  12. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  13. def buffered: MergeLociIterator.this.type

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    Definition Classes
    BufferedIterator → Iterator
  14. final def clear(): Unit

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    Attributes
    protected
    Definition Classes
    SimpleBufferedIterator
  15. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  16. def collect[B](pf: PartialFunction[(Locus, T), B]): Iterator[B]

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    Definition Classes
    Iterator
    Annotations
    @migration
    Migration

    (Changed in version 2.8.0) collect has changed. The previous behavior can be reproduced with toSeq.

  17. def collectFirst[B](pf: PartialFunction[(Locus, T), B]): Option[B]

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    Definition Classes
    TraversableOnce
  18. def contains(elem: Any): Boolean

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    Definition Classes
    Iterator
  19. def copyToArray[B >: (Locus, T)](xs: Array[B], start: Int, len: Int): Unit

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  20. def copyToArray[B >: (Locus, T)](xs: Array[B]): Unit

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  21. def copyToArray[B >: (Locus, T)](xs: Array[B], start: Int): Unit

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  22. def copyToBuffer[B >: (Locus, T)](dest: Buffer[B]): Unit

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    Definition Classes
    TraversableOnce
  23. def corresponds[B](that: GenTraversableOnce[B])(p: ((Locus, T), B) ⇒ Boolean): Boolean

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    Definition Classes
    Iterator
  24. def count(p: ((Locus, T)) ⇒ Boolean): Int

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  25. def drop(n: Int): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  26. def dropWhile(p: ((Locus, T)) ⇒ Boolean): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  27. def duplicate: (Iterator[(Locus, T)], Iterator[(Locus, T)])

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    Definition Classes
    Iterator
  28. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  29. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  30. def exists(p: ((Locus, T)) ⇒ Boolean): Boolean

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  31. def filter(p: ((Locus, T)) ⇒ Boolean): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  32. def filterNot(p: ((Locus, T)) ⇒ Boolean): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  33. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  34. def find(p: ((Locus, T)) ⇒ Boolean): Option[(Locus, T)]

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  35. def flatMap[B](f: ((Locus, T)) ⇒ GenTraversableOnce[B]): Iterator[B]

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    Definition Classes
    Iterator
  36. def fold[A1 >: (Locus, T)](z: A1)(op: (A1, A1) ⇒ A1): A1

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  37. def foldLeft[B](z: B)(op: (B, (Locus, T)) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  38. def foldRight[B](z: B)(op: ((Locus, T), B) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  39. def forall(p: ((Locus, T)) ⇒ Boolean): Boolean

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  40. def foreach[U](f: ((Locus, T)) ⇒ U): Unit

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  41. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  42. def grouped[B >: (Locus, T)](size: Int): GroupedIterator[B]

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    Definition Classes
    Iterator
  43. def hasDefiniteSize: Boolean

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  44. final def hasNext: Boolean

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    Definition Classes
    SimpleBufferedIterator → Iterator
  45. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  46. final def head: (Locus, T)

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    Definition Classes
    SimpleBufferedIterator → BufferedIterator
  47. def indexOf[B >: (Locus, T)](elem: B): Int

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    Definition Classes
    Iterator
  48. def indexWhere(p: ((Locus, T)) ⇒ Boolean): Int

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    Definition Classes
    Iterator
  49. def isEmpty: Boolean

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  50. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  51. def isTraversableAgain: Boolean

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    Definition Classes
    Iterator → GenTraversableOnce
  52. def length: Int

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    Definition Classes
    Iterator
  53. def map[B](f: ((Locus, T)) ⇒ B): Iterator[B]

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    Definition Classes
    Iterator
  54. def max[B >: (Locus, T)](implicit cmp: Ordering[B]): (Locus, T)

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  55. def maxBy[B](f: ((Locus, T)) ⇒ B)(implicit cmp: Ordering[B]): (Locus, T)

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  56. def min[B >: (Locus, T)](implicit cmp: Ordering[B]): (Locus, T)

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  57. def minBy[B](f: ((Locus, T)) ⇒ B)(implicit cmp: Ordering[B]): (Locus, T)

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  58. def mkString: String

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  59. def mkString(sep: String): String

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  60. def mkString(start: String, sep: String, end: String): String

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  61. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  62. final def next(): (Locus, T)

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    Definition Classes
    SimpleBufferedIterator → Iterator
  63. def nonEmpty: Boolean

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  64. final def notify(): Unit

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    Definition Classes
    AnyRef
  65. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  66. def padTo[A1 >: (Locus, T)](len: Int, elem: A1): Iterator[A1]

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    Definition Classes
    Iterator
  67. def partition(p: ((Locus, T)) ⇒ Boolean): (Iterator[(Locus, T)], Iterator[(Locus, T)])

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    Definition Classes
    Iterator
  68. def patch[B >: (Locus, T)](from: Int, patchElems: Iterator[B], replaced: Int): Iterator[B]

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    Definition Classes
    Iterator
  69. def postNext(): Unit

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    Attributes
    protected
    Definition Classes
    SimpleBufferedIterator
  70. def product[B >: (Locus, T)](implicit num: Numeric[B]): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  71. def reduce[A1 >: (Locus, T)](op: (A1, A1) ⇒ A1): A1

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  72. def reduceLeft[B >: (Locus, T)](op: (B, (Locus, T)) ⇒ B): B

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    Definition Classes
    TraversableOnce
  73. def reduceLeftOption[B >: (Locus, T)](op: (B, (Locus, T)) ⇒ B): Option[B]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  74. def reduceOption[A1 >: (Locus, T)](op: (A1, A1) ⇒ A1): Option[A1]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  75. def reduceRight[B >: (Locus, T)](op: ((Locus, T), B) ⇒ B): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  76. def reduceRightOption[B >: (Locus, T)](op: ((Locus, T), B) ⇒ B): Option[B]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  77. def reversed: List[(Locus, T)]

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    Attributes
    protected[this]
    Definition Classes
    TraversableOnce
  78. def sameElements(that: Iterator[_]): Boolean

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    Definition Classes
    Iterator
  79. def scanLeft[B](z: B)(op: (B, (Locus, T)) ⇒ B): Iterator[B]

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    Definition Classes
    Iterator
  80. def scanRight[B](z: B)(op: ((Locus, T), B) ⇒ B): Iterator[B]

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    Definition Classes
    Iterator
  81. def seq: Iterator[(Locus, T)]

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  82. def size: Int

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  83. def slice(from: Int, until: Int): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  84. def sliding[B >: (Locus, T)](size: Int, step: Int): GroupedIterator[B]

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    Definition Classes
    Iterator
  85. def span(p: ((Locus, T)) ⇒ Boolean): (Iterator[(Locus, T)], Iterator[(Locus, T)])

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    Definition Classes
    Iterator
  86. def sum[B >: (Locus, T)](implicit num: Numeric[B]): B

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  87. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  88. def take(n: Int): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  89. def takeWhile(p: ((Locus, T)) ⇒ Boolean): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  90. def to[Col[_]](implicit cbf: CanBuildFrom[Nothing, (Locus, T), Col[(Locus, T)]]): Col[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  91. def toArray[B >: (Locus, T)](implicit arg0: ClassTag[B]): Array[B]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  92. def toBuffer[B >: (Locus, T)]: Buffer[B]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  93. def toIndexedSeq: IndexedSeq[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  94. def toIterable: Iterable[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  95. def toIterator: Iterator[(Locus, T)]

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    Definition Classes
    Iterator → GenTraversableOnce
  96. def toList: List[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  97. def toMap[T, U](implicit ev: <:<[(Locus, T), (T, U)]): Map[T, U]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  98. def toSeq: Seq[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  99. def toSet[B >: (Locus, T)]: Set[B]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  100. def toStream: Stream[(Locus, T)]

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    Definition Classes
    Iterator → GenTraversableOnce
  101. def toString(): String

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    Definition Classes
    Iterator → AnyRef → Any
  102. def toTraversable: Traversable[(Locus, T)]

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    Definition Classes
    Iterator → TraversableOnce → GenTraversableOnce
  103. def toVector: Vector[(Locus, T)]

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    Definition Classes
    TraversableOnce → GenTraversableOnce
  104. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  105. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  106. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  107. def withFilter(p: ((Locus, T)) ⇒ Boolean): Iterator[(Locus, T)]

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    Definition Classes
    Iterator
  108. def zip[B](that: Iterator[B]): Iterator[((Locus, T), B)]

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    Definition Classes
    Iterator
  109. def zipAll[B, A1 >: (Locus, T), B1 >: B](that: Iterator[B], thisElem: A1, thatElem: B1): Iterator[(A1, B1)]

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    Definition Classes
    Iterator
  110. def zipWithIndex: Iterator[((Locus, T), Int)]

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    Definition Classes
    Iterator

Inherited from SimpleBufferedIterator[(Locus, T)]

Inherited from BufferedIterator[(Locus, T)]

Inherited from Iterator[(Locus, T)]

Inherited from TraversableOnce[(Locus, T)]

Inherited from GenTraversableOnce[(Locus, T)]

Inherited from AnyRef

Inherited from Any

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