org.hammerlab.genomics.loci

set

package set

Visibility
  1. Public
  2. All

Type Members

  1. case class Contig(name: ContigName, rangeSet: RangeSet[Long]) extends TruncatedToString with Product with Serializable

    A set of loci on a contig, stored/manipulated as loci ranges.

  2. class ContigSerializer extends com.esotericsoftware.kryo.Serializer[Contig]

  3. case class LociSet(map: SortedMap[ContigName, Contig]) extends TruncatedToString with Product with Serializable

    An immutable collection of genomic regions on any number of contigs.

  4. class Serializer extends com.esotericsoftware.kryo.Serializer[LociSet]

Value Members

  1. object Contig extends Serializable

  2. object LociSet extends Serializable

Ungrouped