Package org.obolibrary.robot
Class FilterCommand
- java.lang.Object
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- org.obolibrary.robot.FilterCommand
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- All Implemented Interfaces:
Command
public class FilterCommand extends Object implements Command
Create a subset of an ontology based on a series of inputs.- Author:
- James A. Overton
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Field Summary
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Fields inherited from interface org.obolibrary.robot.Command
global, missingFileError
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Constructor Summary
Constructors Constructor Description FilterCommand()
Initialize the command.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description CommandState
execute(CommandState state, String[] args)
Given an input state and command line arguments, filter axioms from its ontology, modifying it, and return a state with the modified ontology.String
getDescription()
Brief description of the command.String
getName()
Name of the command.org.apache.commons.cli.Options
getOptions()
Command-line options for the command.String
getUsage()
Command-line usage for the command.void
main(String[] args)
Handle the command-line and file operations.
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Method Detail
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getName
public String getName()
Name of the command.
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getDescription
public String getDescription()
Brief description of the command.- Specified by:
getDescription
in interfaceCommand
- Returns:
- description
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getUsage
public String getUsage()
Command-line usage for the command.
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getOptions
public org.apache.commons.cli.Options getOptions()
Command-line options for the command.- Specified by:
getOptions
in interfaceCommand
- Returns:
- options
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main
public void main(String[] args)
Handle the command-line and file operations.
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execute
public CommandState execute(CommandState state, String[] args) throws Exception
Given an input state and command line arguments, filter axioms from its ontology, modifying it, and return a state with the modified ontology.
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