All Classes

Class	Description
CannotReadQuery	Created by edouglass on 8/9/17.
CatalogElementHandler	A SAX DefaultHandler for reading OWL Catalog files.
CatalogXmlIRIMapper	OWLOntologyIRIMapper using the mappings from a catalog.xml file.
Cell
Column
ColumnException	Template column cannot be parsed.
CURIEShortFormProvider	ShortFormProvider to return CURIEs.
DiffOperation	Get the differences between two ontology files.
EmptyIRIShortFormProvider	Implementation of IRIShortFormProvider that always returns an empty string.
EmptyShortFormProvider	Implementation of ShortFormProvider that always returns an empty string.
EquivalentAxiomReasoningTest	Created by edouglass on 5/9/17.
EquivalentClassReasoning	Created by edouglass on 5/9/17.
EquivalentClassReasoningMode	Created by edouglass on 5/5/17.
ExpandOperation	Expand ontology macro relations.
ExpandOperation.ExpandConfig
ExplainOperation	Compute an explanation for an entailed axiom.
ExportOperation
ExtractOperation	Extract a set of OWLEntities from the input ontology to an output ontology.
FilterOperation	Filter the axioms of an ontology by given criteria.
IncoherentRBoxException	Ontology contains unsatisfiable properties.
IncoherentTBoxException	Ontology contains unsatisfiable classes.
InconsistentOntologyException	Ontology contains logical inconsistencies.
InferredClassAssertionAxiomGeneratorDirectOnly	An InferredAxiomGenerator which returns only direct class assettion axioms.
InferredObjectPropertyDomainAxiomGenerator	An InferredAxiomGenerator which returns both direct and indirect inferred object property domain axioms.
InferredObjectPropertyRangeAxiomGenerator	An InferredAxiomGenerator which returns both direct and indirect inferred object property range axioms.
InferredSubClassAxiomGeneratorIncludingIndirect	An InferredAxiomGenerator which returns both direct and indirect inferred subclass axioms.
InferredSubObjectPropertyAxiomGeneratorIncludingIndirect	An InferredAxiomGenerator which returns both direct and indirect inferred subobjectproperty axioms.
InvalidReferenceChecker	Checks to determine if axioms contain invalid references: to dangling classes or deprecated classes.
InvalidReferenceException	Ontology contains unsatisfiable classes.
InvalidReferenceViolation	Represents a reference violation
InvalidReferenceViolation.Category	A reference may be invalid for different reasons
IOHelper	Provides convenience methods for working with ontology and term files.
IRIValueShortFormProvider	A short form provider that returns full IRIs.
ManchesterOWLSyntaxObjectHTMLRenderer	A version of ManchesterOWLSyntaxObjectRenderer adapted to output named objects as hyperlinks
MaterializeOperation	Materialize SubClassOf axioms using Expression Materializing Reasoner.
MeasureOperation	Compute metrics for the ontology.
MeasureResult
MergeOperation	Merge multiple ontologies into a single ontology.
MetricsLabels
MetricsUtils
MireotOperation	Implements several variations on MIREOT, as first described in "MIREOT: The minimum information to reference an external ontology term" (link).
MirrorOperation	Mirrors ontologies on filesystem.
OntologyCycleDetector
OntologyHelper	Provides convenience methods for working with OWL ontologies.
OntologyLogicException	Ontology contains unsatisfiable classes, properties or inconsistencies.
OntologyMetrics
OntologyStructureException	Ontology contains contains structure that constitutes an exception
OptionsHelper	Provides convenience methods for getting options.
PythonOperation	Starts a gateway server for Py4J to execute ROBOT operations via Python.
QueryOperation	Query an ontology using SPARQL.
QuotedAnnotationValueShortFormProvider	A custom AnnotationValueShortFormProvider that surrounds multi-word values with single quotes when returning the short form when quoting is true.
QuotedEntityChecker	A custom OWLEntityChecker that also resolves names inside single and double quotation marks.
ReasonerHelper	Provides convenience methods for working with OWL reasoning.
ReasonOperation	Reason over an ontology and add axioms.
ReduceOperation	Reason over an ontology and remove redundant SubClassOf axioms
RelatedObjectsHelper	Convenience methods to get related entities for a set of IRIs.
RelationType	Enum containing all possible relation types.
RelaxOperation	Add additional SubClassOf axioms that are relaxed forms of equivalence axioms.
RenameOperation	Rename entity IRIs in an ontology.
RendererType
RepairOperation	Repair an ontology
Report
ReportOperation	Report issues with an ontology using a series of QC SPARQL queries.
ReportQuery
Row
RowParseException	Template row cannot be parsed.
Table
TautologyChecker
Template
TemplateHelper	Convenience methods for working with templates.
TemplateOperation	Generate OWL from tables.
Tuple<A,B>	Created by edouglass on 8/14/17.
UnmergeOperation	Remove axioms from an ontology.
Violation