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XenbaseExpressionToOWL
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package xenbase
object
XenbaseExpressionToOWL
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XenbaseExpressionToOWL
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final
def
!=
(
arg0:
Any
)
:
Boolean
Definition Classes
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final
def
##
()
:
Int
Definition Classes
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final
def
==
(
arg0:
Any
)
:
Boolean
Definition Classes
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final
def
asInstanceOf
[
T0
]
:
T0
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def
clone
()
:
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Attributes
protected[
java.lang
]
Definition Classes
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Annotations
@throws
(
...
)
def
convert
(
expressionData:
Source
,
genepageMappings:
Map
[
String
,
String
]
,
species:
OWLNamedIndividual
)
:
Set
[
OWLAxiom
]
def
convert
(
genepageMappingsFile:
Source
,
laevisExpressionFile:
Source
,
tropicalisExpressionFile:
Source
)
:
Set
[
OWLAxiom
]
final
def
eq
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
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def
equals
(
arg0:
Any
)
:
Boolean
Definition Classes
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def
finalize
()
:
Unit
Attributes
protected[
java.lang
]
Definition Classes
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Annotations
@throws
(
classOf[java.lang.Throwable]
)
final
def
getClass
()
:
Class
[_]
Definition Classes
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def
hashCode
()
:
Int
Definition Classes
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def
indexGenepageMappings
(
mappings:
Source
)
:
Map
[
String
,
String
]
final
def
isInstanceOf
[
T0
]
:
Boolean
Definition Classes
Any
val
laevis
:
OWLNamedIndividual
final
def
ne
(
arg0:
AnyRef
)
:
Boolean
Definition Classes
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final
def
notify
()
:
Unit
Definition Classes
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final
def
notifyAll
()
:
Unit
Definition Classes
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final
def
synchronized
[
T0
]
(
arg0: ⇒
T0
)
:
T0
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def
toString
()
:
String
Definition Classes
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def
translate
(
expressionLine:
String
,
genepageMappings:
Map
[
String
,
String
]
,
species:
OWLNamedIndividual
)
:
Set
[
OWLAxiom
]
val
tropicalis
:
OWLNamedIndividual
final
def
wait
()
:
Unit
Definition Classes
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Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
,
arg1:
Int
)
:
Unit
Definition Classes
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Annotations
@throws
(
...
)
final
def
wait
(
arg0:
Long
)
:
Unit
Definition Classes
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@throws
(
...
)
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