TreeLikelihood

trait TreeLikelihood[F[_], R]
Companion
object
class Object
trait Matchable
class Any

Value members

Abstract methods

def logLikelihood[R, N, L](partition: PartitionKernel[F, R], getN: N => PostOrderNode[R, Matrix, NodeClv], getL: L => PostOrderLeaf[R, Matrix, Clv])(model: Model, tree: GenTree[N, L])(using evidence$2: Group[R]): F[R]
def populate[R, N, L](partition: PartitionKernel[F, R], getN: N => PreOrderNode[R, Matrix, Ppv, NodeClv], getL: L => PostOrderLeaf[R, Matrix, Clv])(model: Model, rootParent: Option[PreOrderRootParent[R, Matrix, Ppv]], tree: GenTree[N, L])(using evidence$3: Group[R]): F[Unit]