Packages

class SampleSheet extends Iterable[Sample]

Stores information about samples from an Illumina Experiment Manager Sample Sheet (typically a MiSeq). The samples may also include derived information.

Optional fields include support for specifying the expected sample barcode for each sample. The sample barcode can be present as a sub-sequence (or sub-sequences) in the i7 or i5 read. If additional bases are found in the i7 or i5 read, such as molecular barcodes, the should be included as Ns. It is up to the developer to obtain the correct read structure elsewhere to infer which bases are sample barcode and which bases are not (ex. molecular identifiers).

The sample identifier should be unique across samples within the sample sheet, and the combination of sample name and library identifier should also be unique across samples within the sample sheet.

Linear Supertypes
Iterable[Sample], IterableLike[Sample, Iterable[Sample]], Equals, GenIterable[Sample], GenIterableLike[Sample, Iterable[Sample]], Traversable[Sample], GenTraversable[Sample], GenericTraversableTemplate[Sample, Iterable], TraversableLike[Sample, Iterable[Sample]], GenTraversableLike[Sample, Iterable[Sample]], Parallelizable[Sample, ParIterable[Sample]], TraversableOnce[Sample], GenTraversableOnce[Sample], FilterMonadic[Sample, Iterable[Sample]], HasNewBuilder[Sample, Iterable[com.fulcrumgenomics.illumina.Sample] @scala.annotation.unchecked.uncheckedVariance], AnyRef, Any
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Inherited
  1. SampleSheet
  2. Iterable
  3. IterableLike
  4. Equals
  5. GenIterable
  6. GenIterableLike
  7. Traversable
  8. GenTraversable
  9. GenericTraversableTemplate
  10. TraversableLike
  11. GenTraversableLike
  12. Parallelizable
  13. TraversableOnce
  14. GenTraversableOnce
  15. FilterMonadic
  16. HasNewBuilder
  17. AnyRef
  18. Any
Implicitly
  1. by CollectionsHaveToParArray
  2. by MonadOps
  3. by any2stringadd
  4. by StringFormat
  5. by Ensuring
  6. by ArrowAssoc
  7. by alternateImplicit
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new SampleSheet(samples: Seq[Sample])

Type Members

  1. type Self = Iterable[Sample]
    Attributes
    protected[this]
    Definition Classes
    TraversableLike
  2. class WithFilter extends FilterMonadic[A, Repr]
    Definition Classes
    TraversableLike

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. def +(other: String): String
    Implicit
    This member is added by an implicit conversion from SampleSheet to any2stringadd[SampleSheet] performed by method any2stringadd in scala.Predef.
    Definition Classes
    any2stringadd
  4. def ++[B >: Sample, That](that: GenTraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  5. def ++:[B >: Sample, That](that: Traversable[B])(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike
  6. def ++:[B >: Sample, That](that: TraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike
  7. def ->[B](y: B): (SampleSheet, B)
    Implicit
    This member is added by an implicit conversion from SampleSheet to ArrowAssoc[SampleSheet] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc
    Annotations
    @inline()
  8. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  9. def addString(b: StringBuilder): StringBuilder
    Definition Classes
    TraversableOnce
  10. def addString(b: StringBuilder, sep: String): StringBuilder
    Definition Classes
    TraversableOnce
  11. def addString(b: StringBuilder, start: String, sep: String, end: String): StringBuilder
    Definition Classes
    TraversableOnce
  12. def aggregate[B](z: ⇒ B)(seqop: (B, Sample) ⇒ B, combop: (B, B) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  13. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  14. def canEqual(that: Any): Boolean
    Definition Classes
    IterableLike → Equals
  15. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  16. def collect[B, That](pf: PartialFunction[Sample, B])(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  17. def collectFirst[B](pf: PartialFunction[Sample, B]): Option[B]
    Definition Classes
    TraversableOnce
  18. def companion: GenericCompanion[Iterable]
    Definition Classes
    Iterable → GenIterable → Traversable → GenTraversable → GenericTraversableTemplate
  19. def copyToArray[B >: Sample](xs: Array[B], start: Int, len: Int): Unit
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  20. def copyToArray[B >: Sample](xs: Array[B]): Unit
    Definition Classes
    TraversableOnce → GenTraversableOnce
  21. def copyToArray[B >: Sample](xs: Array[B], start: Int): Unit
    Definition Classes
    TraversableOnce → GenTraversableOnce
  22. def copyToBuffer[B >: Sample](dest: Buffer[B]): Unit
    Definition Classes
    TraversableOnce
  23. def count(p: (Sample) ⇒ Boolean): Int
    Definition Classes
    TraversableOnce → GenTraversableOnce
  24. def drop(n: Int): Iterable[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  25. def dropRight(n: Int): Iterable[Sample]
    Definition Classes
    IterableLike
  26. def dropWhile(p: (Sample) ⇒ Boolean): Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  27. def ensuring(cond: (SampleSheet) ⇒ Boolean, msg: ⇒ Any): SampleSheet
    Implicit
    This member is added by an implicit conversion from SampleSheet to Ensuring[SampleSheet] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  28. def ensuring(cond: (SampleSheet) ⇒ Boolean): SampleSheet
    Implicit
    This member is added by an implicit conversion from SampleSheet to Ensuring[SampleSheet] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  29. def ensuring(cond: Boolean, msg: ⇒ Any): SampleSheet
    Implicit
    This member is added by an implicit conversion from SampleSheet to Ensuring[SampleSheet] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  30. def ensuring(cond: Boolean): SampleSheet
    Implicit
    This member is added by an implicit conversion from SampleSheet to Ensuring[SampleSheet] performed by method Ensuring in scala.Predef.
    Definition Classes
    Ensuring
  31. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  32. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  33. def exists(p: (Sample) ⇒ Boolean): Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  34. def filter(p: (Sample) ⇒ Boolean): Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  35. def filterNot(p: (Sample) ⇒ Boolean): Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  36. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  37. def find(p: (Sample) ⇒ Boolean): Option[Sample]
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  38. def flatMap[B, That](f: (Sample) ⇒ GenTraversableOnce[B])(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike → FilterMonadic
  39. def flatten[B](implicit asTraversable: (Sample) ⇒ GenTraversableOnce[B]): Iterable[B]
    Definition Classes
    GenericTraversableTemplate
  40. def fold[A1 >: Sample](z: A1)(op: (A1, A1) ⇒ A1): A1
    Definition Classes
    TraversableOnce → GenTraversableOnce
  41. def foldLeft[B](z: B)(op: (B, Sample) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  42. def foldRight[B](z: B)(op: (Sample, B) ⇒ B): B
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  43. def forall(p: (Sample) ⇒ Boolean): Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  44. def foreach[U](f: (Sample) ⇒ U): Unit
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike → TraversableOnce → GenTraversableOnce → FilterMonadic
  45. def formatted(fmtstr: String): String
    Implicit
    This member is added by an implicit conversion from SampleSheet to StringFormat[SampleSheet] performed by method StringFormat in scala.Predef.
    Definition Classes
    StringFormat
    Annotations
    @inline()
  46. def genericBuilder[B]: Builder[B, Iterable[B]]
    Definition Classes
    GenericTraversableTemplate
  47. def get(index: Int): Sample
  48. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  49. def groupBy[K](f: (Sample) ⇒ K): Map[K, Iterable[Sample]]
    Definition Classes
    TraversableLike → GenTraversableLike
  50. def grouped(size: Int): Iterator[Iterable[Sample]]
    Definition Classes
    IterableLike
  51. def hasDefiniteSize: Boolean
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
  52. def hashCode(): Int
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  53. def head: Sample
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  54. def headOption: Option[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  55. def init: Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  56. def inits: Iterator[Iterable[Sample]]
    Definition Classes
    TraversableLike
  57. def isEmpty: Boolean
    Definition Classes
    IterableLike → TraversableLike → TraversableOnce → GenTraversableOnce
  58. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  59. final def isTraversableAgain: Boolean
    Definition Classes
    TraversableLike → GenTraversableLike → GenTraversableOnce
  60. def iterator: Iterator[Sample]
    Definition Classes
    SampleSheet → IterableLike → GenIterableLike
  61. def last: Sample
    Definition Classes
    TraversableLike → GenTraversableLike
  62. def lastOption: Option[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  63. def map[B, That](f: (Sample) ⇒ B)(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike → FilterMonadic
  64. def max[B >: Sample](implicit cmp: Ordering[B]): Sample
    Definition Classes
    TraversableOnce → GenTraversableOnce
  65. def maxBy[B](f: (Sample) ⇒ B)(implicit cmp: Ordering[B]): Sample
    Definition Classes
    TraversableOnce → GenTraversableOnce
  66. def min[B >: Sample](implicit cmp: Ordering[B]): Sample
    Definition Classes
    TraversableOnce → GenTraversableOnce
  67. def minBy[B](f: (Sample) ⇒ B)(implicit cmp: Ordering[B]): Sample
    Definition Classes
    TraversableOnce → GenTraversableOnce
  68. def mkString: String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  69. def mkString(sep: String): String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  70. def mkString(start: String, sep: String, end: String): String
    Definition Classes
    TraversableOnce → GenTraversableOnce
  71. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  72. def newBuilder: Builder[Sample, Iterable[Sample]]
    Attributes
    protected[this]
    Definition Classes
    GenericTraversableTemplate → HasNewBuilder
  73. def nonEmpty: Boolean
    Definition Classes
    TraversableOnce → GenTraversableOnce
  74. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  75. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  76. def par: ParIterable[Sample]
    Definition Classes
    Parallelizable
  77. def parCombiner: Combiner[Sample, ParIterable[Sample]]
    Attributes
    protected[this]
    Definition Classes
    TraversableLike → Parallelizable
  78. def partition(p: (Sample) ⇒ Boolean): (Iterable[Sample], Iterable[Sample])
    Definition Classes
    TraversableLike → GenTraversableLike
  79. def product[B >: Sample](implicit num: Numeric[B]): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  80. def reduce[A1 >: Sample](op: (A1, A1) ⇒ A1): A1
    Definition Classes
    TraversableOnce → GenTraversableOnce
  81. def reduceLeft[B >: Sample](op: (B, Sample) ⇒ B): B
    Definition Classes
    TraversableOnce
  82. def reduceLeftOption[B >: Sample](op: (B, Sample) ⇒ B): Option[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  83. def reduceOption[A1 >: Sample](op: (A1, A1) ⇒ A1): Option[A1]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  84. def reduceRight[B >: Sample](op: (Sample, B) ⇒ B): B
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  85. def reduceRightOption[B >: Sample](op: (Sample, B) ⇒ B): Option[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  86. def repr: Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  87. def reversed: List[Sample]
    Attributes
    protected[this]
    Definition Classes
    TraversableOnce
  88. def sameElements[B >: Sample](that: GenIterable[B]): Boolean
    Definition Classes
    IterableLike → GenIterableLike
  89. def scan[B >: Sample, That](z: B)(op: (B, B) ⇒ B)(implicit cbf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  90. def scanLeft[B, That](z: B)(op: (B, Sample) ⇒ B)(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
  91. def scanRight[B, That](z: B)(op: (Sample, B) ⇒ B)(implicit bf: CanBuildFrom[Iterable[Sample], B, That]): That
    Definition Classes
    TraversableLike → GenTraversableLike
    Annotations
    @migration
    Migration

    (Changed in version 2.9.0) The behavior of scanRight has changed. The previous behavior can be reproduced with scanRight.reverse.

  92. def seq: Iterable[Sample]
    Definition Classes
    Iterable → GenIterable → Traversable → GenTraversable → Parallelizable → TraversableOnce → GenTraversableOnce
  93. def size: Int
    Definition Classes
    SampleSheet → GenTraversableLike → TraversableOnce → GenTraversableOnce
  94. def sizeHintIfCheap: Int
    Attributes
    protected[collection]
    Definition Classes
    GenTraversableOnce
  95. def slice(from: Int, until: Int): Iterable[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  96. def sliding(size: Int, step: Int): Iterator[Iterable[Sample]]
    Definition Classes
    IterableLike
  97. def sliding(size: Int): Iterator[Iterable[Sample]]
    Definition Classes
    IterableLike
  98. def span(p: (Sample) ⇒ Boolean): (Iterable[Sample], Iterable[Sample])
    Definition Classes
    TraversableLike → GenTraversableLike
  99. def splitAt(n: Int): (Iterable[Sample], Iterable[Sample])
    Definition Classes
    TraversableLike → GenTraversableLike
  100. def stringPrefix: String
    Definition Classes
    TraversableLike → GenTraversableLike
  101. def sum[B >: Sample](implicit num: Numeric[B]): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
  102. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  103. def tail: Iterable[Sample]
    Definition Classes
    TraversableLike → GenTraversableLike
  104. def tails: Iterator[Iterable[Sample]]
    Definition Classes
    TraversableLike
  105. def take(n: Int): Iterable[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  106. def takeRight(n: Int): Iterable[Sample]
    Definition Classes
    IterableLike
  107. def takeWhile(p: (Sample) ⇒ Boolean): Iterable[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableLike
  108. def thisCollection: Iterable[Sample]
    Attributes
    protected[this]
    Definition Classes
    IterableLike → TraversableLike
  109. def to[Col[_]](implicit cbf: CanBuildFrom[Nothing, Sample, Col[Sample]]): Col[Sample]
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
  110. def toArray[B >: Sample](implicit arg0: ClassTag[B]): Array[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  111. def toBuffer[B >: Sample]: Buffer[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  112. def toCollection(repr: Iterable[Sample]): Iterable[Sample]
    Attributes
    protected[this]
    Definition Classes
    IterableLike → TraversableLike
  113. def toIndexedSeq: IndexedSeq[Sample]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  114. def toIterable: Iterable[Sample]
    Definition Classes
    IterableLike → TraversableOnce → GenTraversableOnce
  115. def toIterator: Iterator[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableOnce
    Annotations
    @deprecatedOverriding( ... , "2.11.0" )
  116. def toList: List[Sample]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  117. def toMap[T, U](implicit ev: <:<[Sample, (T, U)]): Map[T, U]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  118. def toParArray: ParArray[T]
    Implicit
    This member is added by an implicit conversion from SampleSheet to CollectionsHaveToParArray[SampleSheet, T] performed by method CollectionsHaveToParArray in scala.collection.parallel. This conversion will take place only if an implicit value of type (SampleSheet) ⇒ GenTraversableOnce[T] is in scope.
    Definition Classes
    CollectionsHaveToParArray
  119. def toSeq: Seq[Sample]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  120. def toSet[B >: Sample]: Set[B]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  121. def toStream: Stream[Sample]
    Definition Classes
    IterableLike → TraversableLike → GenTraversableOnce
  122. def toString(): String
    Definition Classes
    TraversableLike → Any
  123. def toTraversable: Traversable[Sample]
    Definition Classes
    TraversableLike → TraversableOnce → GenTraversableOnce
    Annotations
    @deprecatedOverriding( ... , "2.11.0" )
  124. def toVector: Vector[Sample]
    Definition Classes
    TraversableOnce → GenTraversableOnce
  125. def transpose[B](implicit asTraversable: (Sample) ⇒ GenTraversableOnce[B]): Iterable[Iterable[B]]
    Definition Classes
    GenericTraversableTemplate
    Annotations
    @migration
    Migration

    (Changed in version 2.9.0) transpose throws an IllegalArgumentException if collections are not uniformly sized.

  126. def unzip[A1, A2](implicit asPair: (Sample) ⇒ (A1, A2)): (Iterable[A1], Iterable[A2])
    Definition Classes
    GenericTraversableTemplate
  127. def unzip3[A1, A2, A3](implicit asTriple: (Sample) ⇒ (A1, A2, A3)): (Iterable[A1], Iterable[A2], Iterable[A3])
    Definition Classes
    GenericTraversableTemplate
  128. def view(from: Int, until: Int): IterableView[Sample, Iterable[Sample]]
    Definition Classes
    IterableLike → TraversableLike
  129. def view: IterableView[Sample, Iterable[Sample]]
    Definition Classes
    IterableLike → TraversableLike
  130. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  131. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  132. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  133. def withFilter(p: (Sample) ⇒ Boolean): FilterMonadic[Sample, Iterable[Sample]]
    Definition Classes
    TraversableLike → FilterMonadic
  134. def zip[A1 >: Sample, B, That](that: GenIterable[B])(implicit bf: CanBuildFrom[Iterable[Sample], (A1, B), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  135. def zipAll[B, A1 >: Sample, That](that: GenIterable[B], thisElem: A1, thatElem: B)(implicit bf: CanBuildFrom[Iterable[Sample], (A1, B), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  136. def zipWithIndex[A1 >: Sample, That](implicit bf: CanBuildFrom[Iterable[Sample], (A1, Int), That]): That
    Definition Classes
    IterableLike → GenIterableLike
  137. def →[B](y: B): (SampleSheet, B)
    Implicit
    This member is added by an implicit conversion from SampleSheet to ArrowAssoc[SampleSheet] performed by method ArrowAssoc in scala.Predef.
    Definition Classes
    ArrowAssoc

Shadowed Implicit Value Members

  1. def filter(p: (Sample) ⇒ Boolean): TraversableOnce[Sample]
    Implicit
    This member is added by an implicit conversion from SampleSheet to MonadOps[Sample] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (sampleSheet: MonadOps[Sample]).filter(p)
    Definition Classes
    MonadOps
  2. def flatMap[B](f: (Sample) ⇒ GenTraversableOnce[B]): TraversableOnce[B]
    Implicit
    This member is added by an implicit conversion from SampleSheet to MonadOps[Sample] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (sampleSheet: MonadOps[Sample]).flatMap(f)
    Definition Classes
    MonadOps
  3. def map[B](f: (Sample) ⇒ B): TraversableOnce[B]
    Implicit
    This member is added by an implicit conversion from SampleSheet to MonadOps[Sample] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (sampleSheet: MonadOps[Sample]).map(f)
    Definition Classes
    MonadOps
  4. def withFilter(p: (Sample) ⇒ Boolean): Iterator[Sample]
    Implicit
    This member is added by an implicit conversion from SampleSheet to MonadOps[Sample] performed by method MonadOps in scala.collection.TraversableOnce.
    Shadowing
    This implicitly inherited member is shadowed by one or more members in this class.
    To access this member you can use a type ascription:
    (sampleSheet: MonadOps[Sample]).withFilter(p)
    Definition Classes
    MonadOps

Deprecated Value Members

  1. def /:[B](z: B)(op: (B, Sample) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
    Annotations
    @deprecated
    Deprecated

    (Since version 2.12.10) Use foldLeft instead of /:

  2. def :\[B](z: B)(op: (Sample, B) ⇒ B): B
    Definition Classes
    TraversableOnce → GenTraversableOnce
    Annotations
    @deprecated
    Deprecated

    (Since version 2.12.10) Use foldRight instead of :\

Inherited from Iterable[Sample]

Inherited from IterableLike[Sample, Iterable[Sample]]

Inherited from Equals

Inherited from GenIterable[Sample]

Inherited from GenIterableLike[Sample, Iterable[Sample]]

Inherited from Traversable[Sample]

Inherited from GenTraversable[Sample]

Inherited from GenericTraversableTemplate[Sample, Iterable]

Inherited from TraversableLike[Sample, Iterable[Sample]]

Inherited from GenTraversableLike[Sample, Iterable[Sample]]

Inherited from Parallelizable[Sample, ParIterable[Sample]]

Inherited from TraversableOnce[Sample]

Inherited from GenTraversableOnce[Sample]

Inherited from FilterMonadic[Sample, Iterable[Sample]]

Inherited from HasNewBuilder[Sample, Iterable[com.fulcrumgenomics.illumina.Sample] @scala.annotation.unchecked.uncheckedVariance]

Inherited from AnyRef

Inherited from Any

Inherited by implicit conversion CollectionsHaveToParArray from SampleSheet to CollectionsHaveToParArray[SampleSheet, T]

Inherited by implicit conversion MonadOps from SampleSheet to MonadOps[Sample]

Inherited by implicit conversion any2stringadd from SampleSheet to any2stringadd[SampleSheet]

Inherited by implicit conversion StringFormat from SampleSheet to StringFormat[SampleSheet]

Inherited by implicit conversion Ensuring from SampleSheet to Ensuring[SampleSheet]

Inherited by implicit conversion ArrowAssoc from SampleSheet to ArrowAssoc[SampleSheet]

Inherited by implicit conversion alternateImplicit from SampleSheet to ForceImplicitAmbiguity

Ungrouped