Value Members

1.  final def !=(arg0: Any): Boolean

   Definition Classes

   AnyRef → Any

2.  final def ##(): Int

   Definition Classes

   AnyRef → Any

3.  final def ==(arg0: Any): Boolean

   Definition Classes

   AnyRef → Any

4.  def ar[S](c: DenseVector[Double] = ...)(implicit arg0: State[S]): Spn[S]

   A simple auto-regulatory network model

   A simple auto-regulatory network model

   returns

   An Spn object, which can be passed into a Step function, for example

5.  final def asInstanceOf[T0]: T0

   Definition Classes

   Any

6.  def clone(): AnyRef

   Attributes

   protected[lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( ... ) @native()

7.  final def eq(arg0: AnyRef): Boolean

   Definition Classes

   AnyRef

8.  def equals(arg0: Any): Boolean

   Definition Classes

   AnyRef → Any

9.  def finalize(): Unit

   Attributes

   protected[lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( classOf[java.lang.Throwable] )

10.  final def getClass(): Class[_]

    Definition Classes

    AnyRef → Any

    Annotations

    @native()

11.  def hashCode(): Int

    Definition Classes

    AnyRef → Any

    Annotations

    @native()

12.  def id[S](p: DenseVector[Double] = DenseVector(1.0, 0.1))(implicit arg0: State[S]): Spn[S]

    Imigration-death model

    Imigration-death model

    p

    Vector of rates for the 2 reactions (imigration and death)

    returns

    An Spn object, which can be passed into a Step function, for example

13.  final def isInstanceOf[T0]: Boolean

    Definition Classes

    Any

14.  def lv[S](p: DenseVector[Double] = DenseVector(1.0, 0.005, 0.6))(implicit arg0: State[S]): Spn[S]

    Lotka-Volterra model

    Lotka-Volterra model

    p

    Vector of rates for the 3 reactions (prey reproduction, predator-prey interaction, predator death)

    returns

    An Spn object, which can be passed into a Step function, for example

15.  def lv4[S](p: DenseVector[Double] = DenseVector(1.0, 0.005, 0.005, 0.6))(implicit arg0: State[S]): Spn[S]

    4-parameter Lotka-Volterra model

    4-parameter Lotka-Volterra model

    p

    Vector of rates for the 4 reactions (prey reproduction, prey consumption, predator reproduction, predator death)

    returns

    An Spn object, which can be passed into a Step function, for example

16.  def mm[S](p: DenseVector[Double] = DenseVector(0.00166, 1e-04, 0.1))(implicit arg0: State[S]): Spn[S]

    Michaelis-Menten enzyme kinetics model

    Michaelis-Menten enzyme kinetics model

    p

    Vector of rates for the 3 reactions

    returns

    An Spn object, which can be passed into a Step function, for example

17.  final def ne(arg0: AnyRef): Boolean

    Definition Classes

    AnyRef

18.  final def notify(): Unit

    Definition Classes

    AnyRef

    Annotations

    @native()

19.  final def notifyAll(): Unit

    Definition Classes

    AnyRef

    Annotations

    @native()

20.  def seir[S](p: DenseVector[Double] = DenseVector(0.1, 0.2, 0.5))(implicit arg0: State[S]): Spn[S]

    SEIR model

    SEIR model

    p

    Vector of rates for the 3 reactions (S->E, E->I, and I->R)

    returns

    An Spn object, which can be passed into a Step function, for example

21.  def sir[S](p: DenseVector[Double] = DenseVector(0.1, 0.5))(implicit arg0: State[S]): Spn[S]

    SIR model

    SIR model

    p

    Vector of rates for the 2 reactions (S->I and I->R)

    returns

    An Spn object, which can be passed into a Step function, for example

22.  final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes

    AnyRef

23.  def toString(): String

    Definition Classes

    AnyRef → Any

24.  final def wait(): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

25.  final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

26.  final def wait(arg0: Long): Unit

    Definition Classes

    AnyRef

    Annotations

    @throws( ... ) @native()