htsjdk.samtools.cram.encoding.reader

Class DataReaderFactory.DataReaderWithStats<T>

java.lang.Object

htsjdk.samtools.cram.encoding.reader.DataReaderFactory.DataReaderWithStats<T>

All Implemented Interfaces:

DataReader<T>

Enclosing class:

DataReaderFactory

public static class DataReaderFactory.DataReaderWithStats<T>
extends java.lang.Object
implements DataReader<T>

Field Summary

Fields

Modifier and Type	Field and Description
long	nanos

Constructor Summary

Constructors

Constructor and Description
DataReaderFactory.DataReaderWithStats(DataReader<T> delegate)

Method Summary

Methods

Modifier and Type	Method and Description
void	readByteArrayInto(byte[] dest, int offset, int len)
T	readData()
T	readDataArray(int len)
void	skip()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

nanos

public long nanos

Constructor Detail

DataReaderFactory.DataReaderWithStats

public DataReaderFactory.DataReaderWithStats(DataReader<T> delegate)

Method Detail

readData

public T readData()
           throws java.io.IOException

Specified by:

readData in interface DataReader<T>

Throws:

java.io.IOException

readDataArray

public T readDataArray(int len)
                throws java.io.IOException

Specified by:

readDataArray in interface DataReader<T>

Throws:

java.io.IOException

skip

public void skip()
          throws java.io.IOException

Specified by:

skip in interface DataReader<T>

Throws:

java.io.IOException

readByteArrayInto

public void readByteArrayInto(byte[] dest,
                     int offset,
                     int len)
                       throws java.io.IOException

Specified by:

readByteArrayInto in interface DataReader<T>

Throws:

java.io.IOException