htsjdk.samtools

Enum SAMReadGroupRecord.PlatformValue

java.lang.Object

java.lang.Enum<SAMReadGroupRecord.PlatformValue>

htsjdk.samtools.SAMReadGroupRecord.PlatformValue

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<SAMReadGroupRecord.PlatformValue>

Enclosing class:

SAMReadGroupRecord

public static enum SAMReadGroupRecord.PlatformValue
extends java.lang.Enum<SAMReadGroupRecord.PlatformValue>

Enum Constant Summary

Enum Constants

Enum Constant and Description
BGI Deprecated. Use DNBSEQ instead.
CAPILLARY Capillary
DNBSEQ MGI/BGI
ELEMENT Element Biosciences
HELICOS Helicos Biosciences
ILLUMINA Illumina
IONTORRENT Iontorrent
LS454 454 Life Sciences
ONT Oxford Nanopore
OTHER Deprecated. OTHER is not an official value. It is recommended to omit PL if it is not in this list or is unknown.
PACBIO Pacific Biotechnology
SOLID Life Technologies
ULTIMA Ultima Genomics

Method Summary

Modifier and Type	Method and Description
static SAMReadGroupRecord.PlatformValue	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static SAMReadGroupRecord.PlatformValue[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

BGI

@Deprecated
public static final SAMReadGroupRecord.PlatformValue BGI

Deprecated. Use DNBSEQ instead.

CAPILLARY

public static final SAMReadGroupRecord.PlatformValue CAPILLARY

Capillary

DNBSEQ

public static final SAMReadGroupRecord.PlatformValue DNBSEQ

MGI/BGI

ELEMENT

public static final SAMReadGroupRecord.PlatformValue ELEMENT

Element Biosciences

HELICOS

public static final SAMReadGroupRecord.PlatformValue HELICOS

Helicos Biosciences

ILLUMINA

public static final SAMReadGroupRecord.PlatformValue ILLUMINA

Illumina

IONTORRENT

public static final SAMReadGroupRecord.PlatformValue IONTORRENT

Iontorrent

LS454

public static final SAMReadGroupRecord.PlatformValue LS454

454 Life Sciences

ONT

public static final SAMReadGroupRecord.PlatformValue ONT

Oxford Nanopore

OTHER

@Deprecated
public static final SAMReadGroupRecord.PlatformValue OTHER

Deprecated. OTHER is not an official value. It is recommended to omit PL if it is not in this list or is unknown.

PACBIO

public static final SAMReadGroupRecord.PlatformValue PACBIO

Pacific Biotechnology

SOLID

public static final SAMReadGroupRecord.PlatformValue SOLID

Life Technologies

ULTIMA

public static final SAMReadGroupRecord.PlatformValue ULTIMA

Ultima Genomics

Method Detail

values

public static SAMReadGroupRecord.PlatformValue[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (SAMReadGroupRecord.PlatformValue c : SAMReadGroupRecord.PlatformValue.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static SAMReadGroupRecord.PlatformValue valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null