A B C D E F G H I L M N O P R S T U V W

A

a - Variable in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

a - Variable in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

a - Variable in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

a - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

a - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

a - Variable in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

a - Variable in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

abs() - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

abs() - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

AbsVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

AbsVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.AbsVertex

add(String, T) - Method in class io.improbable.keanu.plating.Plate

add(Plate) - Method in class io.improbable.keanu.plating.Plates

add(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

add(Infinitesimal) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

addChild(Vertex<?>) - Method in class io.improbable.keanu.vertices.Vertex

AdditionVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

AdditionVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.AdditionVertex

addLatentVertex(Vertex<T>, T) - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

addObservedVertex(Vertex<T>) - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

addParent(Vertex<?>) - Method in class io.improbable.keanu.vertices.Vertex

addParents(Collection<? extends Vertex<?>>) - Method in class io.improbable.keanu.vertices.Vertex

and(Vertex<Boolean>...) - Method in class io.improbable.keanu.vertices.bool.BoolVertex

AndBinaryVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary

AndBinaryVertex(Vertex<Boolean>, Vertex<Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.AndBinaryVertex

AndMultipleVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple

AndMultipleVertex(Collection<Vertex<Boolean>>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.AndMultipleVertex

ArcCosVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

ArcCosVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcCosVertex

ArcCosVertex(double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcCosVertex

ArcSinVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

ArcSinVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcSinVertex

ArcSinVertex(double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcSinVertex

as(Class<T>) - Method in class io.improbable.keanu.util.csv.CsvReader

asList() - Method in class io.improbable.keanu.algorithms.VertexSamples

asList() - Method in class io.improbable.keanu.plating.Plates

asList(boolean) - Method in class io.improbable.keanu.util.csv.pojo.ObjectParser

asList() - Method in class io.improbable.keanu.util.csv.pojo.ObjectParser

B

b - Variable in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

b - Variable in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

b - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

b - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

b - Variable in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

b - Variable in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

BAD_OBSERVATION_WARNING - Static variable in exception io.improbable.keanu.vertices.NonProbabilisticObservationException

BayesNet - Class in io.improbable.keanu.network

A wrapper around a collection of connected vertices.

BayesNet(Set<? extends Vertex<?>>) - Constructor for class io.improbable.keanu.network.BayesNet

BayesNet(Collection<? extends Vertex<?>>) - Constructor for class io.improbable.keanu.network.BayesNet

Beta - Class in io.improbable.keanu.distributions.continuous

Beta() - Constructor for class io.improbable.keanu.distributions.continuous.Beta

Beta.Diff - Class in io.improbable.keanu.distributions.continuous

BetaVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

BetaVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

BetaVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

BinaryOpLambda<A,B,OUT> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary

BinaryOpLambda(Vertex<A>, Vertex<B>, BiFunction<A, B, OUT>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpLambda

BinaryOpVertex<A,B,C> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary

BinaryOpVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

BoolBinaryOpLambda<A,B> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary

BoolBinaryOpLambda(Vertex<A>, Vertex<B>, BiFunction<A, B, Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpLambda

BoolBinaryOpVertex<A,B> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary

BoolBinaryOpVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

BoolReduceVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple

BoolReduceVertex(Collection<Vertex<Boolean>>, BiFunction<Boolean, Boolean, Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.BoolReduceVertex

BoolReduceVertex(BiFunction<Boolean, Boolean, Boolean>, Vertex<Boolean>...) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.BoolReduceVertex

BoolUnaryOpLambda<A> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary

BoolUnaryOpLambda(Vertex<A>, Function<A, Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpLambda

BoolUnaryOpVertex<A> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary

BoolUnaryOpVertex(Vertex<A>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

BoolVertex - Class in io.improbable.keanu.vertices.bool

BoolVertex() - Constructor for class io.improbable.keanu.vertices.bool.BoolVertex

build() - Method in class io.improbable.keanu.plating.PlateBuilder.FromCountFactory

build() - Method in class io.improbable.keanu.plating.PlateBuilder.FromDataFactory

C

cascadeValue(Vertex<T>) - Static method in class io.improbable.keanu.network.BayesNet

cascadeValues(List<? extends Vertex<?>>) - Static method in class io.improbable.keanu.network.BayesNet

CastBoolVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic

CastBoolVertex(Vertex<Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.CastBoolVertex

CastDoubleVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic

CastDoubleVertex(Vertex<Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.CastDoubleVertex

CastIntegerVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic

CastIntegerVertex(Vertex<Integer>) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.CastIntegerVertex

clone() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

Condition(boolean[]) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex.Condition

Constant<T> - Interface in io.improbable.keanu.vertices

This interface is used to identify vertices that are constants.

ConstantBoolVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic

ConstantBoolVertex(Boolean) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.ConstantBoolVertex

ConstantDoubleVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic

ConstantDoubleVertex(Double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.ConstantDoubleVertex

ConstantIntegerVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic

ConstantIntegerVertex(Integer) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.ConstantIntegerVertex

ConstantVertex<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

ConstantVertex(T) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.ConstantVertex

ContinuousPoint - Class in io.improbable.keanu.network.grouping

ContinuousPoint(double[]) - Constructor for class io.improbable.keanu.network.grouping.ContinuousPoint

ContinuousPointGrouper - Interface in io.improbable.keanu.network.grouping.continuousPointGroupers

convertDualNumbersToDiff(double, double, double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

CosVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

CosVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.CosVertex

CosVertex(double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.CosVertex

count(int) - Method in class io.improbable.keanu.plating.PlateBuilder

Build a fixed number of plates without additional data

CPT - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPT() - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT

CPT.CPTBuilder<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPT.CPTBuilder.CPTWhenBuilder<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPT.CPTRawBuilder - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPT.CPTWhenRawBuilder - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPTBuilder(List<Vertex<Boolean>>, Map<CPTVertex.Condition, Vertex<T>>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTBuilder

CPTRawBuilder(List<Vertex<Boolean>>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTRawBuilder

CPTVertex<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPTVertex(List<Vertex<Boolean>>, Map<CPTVertex.Condition, Vertex<T>>, Vertex<T>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex

CPTVertex.Condition - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

CPTWhenRawBuilder(boolean[], List<Vertex<Boolean>>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTWhenRawBuilder

CsvColumnConsumer<T> - Interface in io.improbable.keanu.util.csv.pojo

A ColumnConsumer is a function that takes some object and some String value and applies the String value to the object.

CsvProperty - Annotation Type in io.improbable.keanu.util.csv.pojo

CsvReader - Class in io.improbable.keanu.util.csv

CsvReader(Supplier<Reader>) - Constructor for class io.improbable.keanu.util.csv.CsvReader

D

DBSCANContinuousPointGrouper - Class in io.improbable.keanu.network.grouping.continuousPointGroupers

DBSCANContinuousPointGrouper(double, int) - Constructor for class io.improbable.keanu.network.grouping.continuousPointGroupers.DBSCANContinuousPointGrouper

dDensityAtValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

dDensityAtValue() - Method in class io.improbable.keanu.vertices.bool.probabilistic.Flip

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

dDensityAtValue() - Method in class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

dDensityAtValue() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

dDensityAtValue() - Method in class io.improbable.keanu.vertices.Vertex

This returns the derivative of the density function with respect to any dependent vertices.

density(Boolean) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

density(Boolean) - Method in class io.improbable.keanu.vertices.bool.probabilistic.Flip

density(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

density(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

density(T) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

density(T) - Method in class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

density(Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

density(Integer) - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

density(Integer) - Method in class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

density(Integer) - Method in class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

density(T) - Method in class io.improbable.keanu.vertices.Vertex

This is the value of the probability density at the supplied value.

densityAtValue() - Method in class io.improbable.keanu.vertices.Vertex

Just a helper method for a common function

Diff(double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Beta.Diff

Diff(double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Exponential.Diff

Diff(double, double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Gamma.Diff

Diff(double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Gaussian.Diff

Diff(double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Laplace.Diff

Diff(double, double, double) - Constructor for class io.improbable.keanu.distributions.continuous.Logistic.Diff

DifferenceVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

DifferenceVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DifferenceVertex

DiscoverGraph - Class in io.improbable.keanu.algorithms.graphtraversal

DiscoverGraph() - Constructor for class io.improbable.keanu.algorithms.graphtraversal.DiscoverGraph

DiscretePoint - Class in io.improbable.keanu.network.grouping

DiscretePoint(Object[]) - Constructor for class io.improbable.keanu.network.grouping.DiscretePoint

div(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

div(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

div(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

div(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

div(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

div(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

divideBy(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

divideBy(Vertex<Double>) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

divideBy(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

divideBy(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

divideBy(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

divideBy(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

divideBy(Vertex<Integer>) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

divideBy(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

DivisionVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

DivisionVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DivisionVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

dlnDensityAtValue() - Method in class io.improbable.keanu.vertices.Vertex

This is the same as dDensityAtValue except for the log of the density.

dlnPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Beta

dlnPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Exponential

dlnPdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gamma

dlnPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gaussian

dlnPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Laplace

dlnPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Logistic

DoubleBinaryOpLambda<A,B> - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

DoubleBinaryOpLambda(Vertex<A>, Vertex<B>, BiFunction<A, B, Double>, Supplier<DualNumber>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

DoubleBinaryOpLambda(Vertex<A>, Vertex<B>, BiFunction<A, B, Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

DoubleBinaryOpVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

DoubleBinaryOpVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

DoubleReduceVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple

DoubleReduceVertex(Collection<? extends Vertex<Double>>, BiFunction<Double, Double, Double>, Supplier<DualNumber>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

DoubleReduceVertex(BiFunction<Double, Double, Double>, Supplier<DualNumber>, Vertex<Double>...) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

DoubleReduceVertex(List<? extends Vertex<Double>>, BiFunction<Double, Double, Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

DoubleUnaryOpLambda<IN> - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

DoubleUnaryOpLambda(Vertex<IN>, Function<IN, Double>, Supplier<DualNumber>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

DoubleUnaryOpLambda(Vertex<IN>, Function<IN, Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

DoubleUnaryOpVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

DoubleUnaryOpVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

DoubleVertex - Class in io.improbable.keanu.vertices.dbl

DoubleVertex() - Constructor for class io.improbable.keanu.vertices.dbl.DoubleVertex

DoubleVertexFactory - Class in io.improbable.keanu.randomFactory

DoubleVertexFactory() - Constructor for class io.improbable.keanu.randomFactory.DoubleVertexFactory

DoubleVertexSamples - Class in io.improbable.keanu.vertices.dbl

DoubleVertexSamples(List<Double>) - Constructor for class io.improbable.keanu.vertices.dbl.DoubleVertexSamples

downSample(int) - Method in class io.improbable.keanu.algorithms.NetworkSamples

dPda - Variable in class io.improbable.keanu.distributions.continuous.Exponential.Diff

dPda - Variable in class io.improbable.keanu.distributions.continuous.Gamma.Diff

dPda - Variable in class io.improbable.keanu.distributions.continuous.Logistic.Diff

dPdAlpha - Variable in class io.improbable.keanu.distributions.continuous.Beta.Diff

dPdb - Variable in class io.improbable.keanu.distributions.continuous.Exponential.Diff

dPdb - Variable in class io.improbable.keanu.distributions.continuous.Logistic.Diff

dPdBeta - Variable in class io.improbable.keanu.distributions.continuous.Beta.Diff

dPdbeta - Variable in class io.improbable.keanu.distributions.continuous.Laplace.Diff

dPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Beta

dPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Exponential

dPdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gamma

dPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gaussian

dPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Laplace

dPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Logistic

dPdfdx(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.SmoothUniformDistribution

dPdk - Variable in class io.improbable.keanu.distributions.continuous.Gamma.Diff

dPdmu - Variable in class io.improbable.keanu.distributions.continuous.Gaussian.Diff

dPdmu - Variable in class io.improbable.keanu.distributions.continuous.Laplace.Diff

dPdsigma - Variable in class io.improbable.keanu.distributions.continuous.Gaussian.Diff

dPdtheta - Variable in class io.improbable.keanu.distributions.continuous.Gamma.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Beta.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Exponential.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Gamma.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Gaussian.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Laplace.Diff

dPdx - Variable in class io.improbable.keanu.distributions.continuous.Logistic.Diff

drop(int) - Method in class io.improbable.keanu.algorithms.NetworkSamples

DualNumber - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.diff

DualNumber(double, Infinitesimal) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

DualNumber(double, Map<String, Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

DualNumber(double, String) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

dualNumberSupplier - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

dualNumberSupplier - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

dualNumberSupplier - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

E

equals(Object) - Method in class io.improbable.keanu.network.grouping.DiscretePoint

equals(Object) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex.Condition

equals(Object) - Method in class io.improbable.keanu.vertices.Vertex

EqualsVertex<T> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

EqualsVertex(Vertex<T>, Vertex<T>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.EqualsVertex

expectHeader(boolean) - Method in class io.improbable.keanu.util.csv.CsvReader

Tells the reader to either treat the first line of the file as a header or as data.

Exponential - Class in io.improbable.keanu.distributions.continuous

Exponential() - Constructor for class io.improbable.keanu.distributions.continuous.Exponential

Exponential.Diff - Class in io.improbable.keanu.distributions.continuous

exponentialSchedule(int, double, double) - Static method in class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

ExponentialVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

ExponentialVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(double, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(DoubleVertex, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(double, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

ExponentialVertex(DoubleVertex, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

F

f - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

FALSE - Static variable in class io.improbable.keanu.vertices.bool.BoolVertex

findModesBySimulatedAnnealing(BayesNet, int, int) - Static method in class io.improbable.keanu.algorithms.mcmc.initialConditions.MultiModeDiscovery

fitness() - Method in class io.improbable.keanu.algorithms.variational.FitnessFunction

FitnessFunction - Class in io.improbable.keanu.algorithms.variational

FitnessFunction(List<Vertex<?>>, List<? extends Vertex<Double>>) - Constructor for class io.improbable.keanu.algorithms.variational.FitnessFunction

FitnessFunctionWithGradient - Class in io.improbable.keanu.algorithms.variational

FitnessFunctionWithGradient(List<Vertex<?>>, List<? extends Vertex<Double>>) - Constructor for class io.improbable.keanu.algorithms.variational.FitnessFunctionWithGradient

Flip - Class in io.improbable.keanu.vertices.bool.probabilistic

Flip(Vertex<Double>, Random) - Constructor for class io.improbable.keanu.vertices.bool.probabilistic.Flip

Flip(double, Random) - Constructor for class io.improbable.keanu.vertices.bool.probabilistic.Flip

Flip(double) - Constructor for class io.improbable.keanu.vertices.bool.probabilistic.Flip

FromCount(int) - Constructor for class io.improbable.keanu.plating.PlateBuilder.FromCount

fromFile(String) - Static method in class io.improbable.keanu.util.csv.ReadCsv

fromFile(Path) - Static method in class io.improbable.keanu.util.csv.ReadCsv

fromIterator(Iterator<T>) - Method in class io.improbable.keanu.plating.PlateBuilder

Build an unspecified number of plates with data from an iterator

fromIterator(Iterator<T>, int) - Method in class io.improbable.keanu.plating.PlateBuilder

Build a number of plates with data from an iterator

fromResources(String) - Static method in class io.improbable.keanu.util.csv.ReadCsv

fromString(String) - Static method in class io.improbable.keanu.util.csv.ReadCsv

FuzzyCastToIntegerVertex - Class in io.improbable.keanu.vertices.intgr.probabilistic

FuzzyCastToIntegerVertex(DoubleVertex, DoubleVertex, Vertex<Integer>, Vertex<Integer>, Random) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

Takes a double and casts it to an integer with a user definable level of fuzziness over the value cast to.

FuzzyCastToIntegerVertex(DoubleVertex, double, int, int, Random) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

G

Gamma - Class in io.improbable.keanu.distributions.continuous

Gamma() - Constructor for class io.improbable.keanu.distributions.continuous.Gamma

Gamma.Diff - Class in io.improbable.keanu.distributions.continuous

GammaVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

GammaVertex(DoubleVertex, DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

GammaVertex(DoubleVertex, DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

Gaussian - Class in io.improbable.keanu.distributions.continuous

Gaussian() - Constructor for class io.improbable.keanu.distributions.continuous.Gaussian

Gaussian.Diff - Class in io.improbable.keanu.distributions.continuous

GaussianVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

GaussianVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(double, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(DoubleVertex, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(double, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

GaussianVertex(DoubleVertex, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

get(Vertex<?>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.MarkovBlanket

get(Vertex<T>) - Method in class io.improbable.keanu.algorithms.NetworkSamples

get(String) - Method in class io.improbable.keanu.algorithms.NetworkSamples

get(Vertex<T>) - Method in interface io.improbable.keanu.network.NetworkState

get(String) - Method in interface io.improbable.keanu.network.NetworkState

get(Vertex<T>) - Method in class io.improbable.keanu.network.SimpleNetworkState

get(String) - Method in class io.improbable.keanu.network.SimpleNetworkState

get(String) - Method in class io.improbable.keanu.plating.Plate

getA() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

getA() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

getA() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

getAlpha() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

getB() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

getB() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

getBeta() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

getChildren() - Method in class io.improbable.keanu.vertices.Vertex

getConnectedGraph() - Method in class io.improbable.keanu.vertices.Vertex

getContinuousLatentVertices() - Method in class io.improbable.keanu.network.BayesNet

getCount() - Method in class io.improbable.keanu.plating.PlateBuilder.FromCount

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.CastBoolVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.ConstantBoolVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.BoolReduceVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.CastDoubleVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.ConstantDoubleVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

getDerivedValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.ConstantVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.IfVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.MultiplexerVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.CastIntegerVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.ConstantIntegerVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

getDerivedValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

getDiscreteLatentVertices() - Method in class io.improbable.keanu.network.BayesNet

getDoubles(Vertex<Double>) - Method in class io.improbable.keanu.algorithms.NetworkSamples

getDoubles(String) - Method in class io.improbable.keanu.algorithms.NetworkSamples

getDownstreamProbabilisticVertices(Vertex<?>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.MarkovBlanket

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.CastDoubleVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.ConstantDoubleVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.AdditionVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DifferenceVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DivisionVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.MultiplicationVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.PowerVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.AbsVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcCosVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcSinVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.CosVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.LogVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.SinVertex

getDualNumber() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ProbabilisticDouble

getEdgeSharpness() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

getEntireGraph(Vertex<?>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.DiscoverGraph

getFuzzinessSigma() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

getHeader() - Method in class io.improbable.keanu.util.csv.CsvReader

Gets the header of the csv file if one exist otherwise an empty list.

getId() - Method in interface io.improbable.keanu.Identifiable

getId() - Method in class io.improbable.keanu.vertices.Vertex

getInfinitesimal() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

getInfinitesimals() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

getInput() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

getIterator() - Method in class io.improbable.keanu.plating.PlateBuilder.FromIterator

getK() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

getLatentVertices() - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

getLatentVertices() - Method in class io.improbable.keanu.network.BayesNet

getLogOfMasterP() - Method in class io.improbable.keanu.network.BayesNet

getMax() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

getMax() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

getMaxAPosteriori(BayesNet, int, SimulatedAnnealing.AnnealingSchedule) - Static method in class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

Finds the MAP using the specified annealing schedule.

getMaxAPosteriori(BayesNet, int, Random) - Static method in class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

getMaxAPosteriori(BayesNet, int) - Static method in class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

Finds the MAP using the default annealing schedule, which is an exponential decay schedule.

getMaxAPosteriori(BayesNet, int, SimulatedAnnealing.AnnealingSchedule, Random) - Static method in class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

getMin() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

getMin() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

getMode() - Method in class io.improbable.keanu.algorithms.VertexSamples

getMomentum() - Method in class io.improbable.keanu.algorithms.mcmc.Leapfrog

getMu() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

getMu() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

getObservedVertices() - Method in class io.improbable.keanu.network.BayesNet

getParents() - Method in class io.improbable.keanu.vertices.Vertex

getPoint() - Method in class io.improbable.keanu.network.grouping.ContinuousPoint

getPoint() - Method in class io.improbable.keanu.network.grouping.DiscretePoint

getPosition() - Method in class io.improbable.keanu.algorithms.mcmc.Leapfrog

getPosteriorProbability(List<? extends Vertex<?>>, List<Vertex<?>>, Supplier<Boolean>, int) - Static method in class io.improbable.keanu.algorithms.sampling.RejectionSampler

getPosteriorSamples(BayesNet, List<DoubleVertex>, int, int, double) - Static method in class io.improbable.keanu.algorithms.mcmc.Hamiltonian

getPosteriorSamples(BayesNet, List<DoubleVertex>, int, int, double, List<Double>, Random) - Static method in class io.improbable.keanu.algorithms.mcmc.Hamiltonian

getPosteriorSamples(BayesNet, List<? extends Vertex<?>>, int) - Static method in class io.improbable.keanu.algorithms.mcmc.MetropolisHastings

getPosteriorSamples(BayesNet, List<? extends Vertex<?>>, int, Random) - Static method in class io.improbable.keanu.algorithms.mcmc.MetropolisHastings

getPosteriorSamples(BayesNet, List<Vertex<?>>, int) - Static method in class io.improbable.keanu.algorithms.sampling.RejectionSampler

getProbableValues(Collection<? extends Vertex<?>>, int, int, double, Random) - Static method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter

A particle filtering approach is used to find probable values for the latent vertices of a Bayesian network, given a set of observed vertices.

getProbTrue() - Method in class io.improbable.keanu.vertices.bool.probabilistic.Flip

getSelectableValues() - Method in class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

getSigma() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

getSumLogPOfSubgraph() - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

getSummaryStatistics() - Method in class io.improbable.keanu.vertices.dbl.DoubleVertexSamples

getT(int) - Method in interface io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing.AnnealingSchedule

getTheta() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

getUpstreamProbabilisticVertices(Vertex<?>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.MarkovBlanket

getUpstreamProbabilisticVertices(Collection<Vertex<?>>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.MarkovBlanket

getValue() - Method in interface io.improbable.keanu.vertices.Constant

getValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

getValue() - Method in class io.improbable.keanu.vertices.Vertex

getVertexIds() - Method in interface io.improbable.keanu.network.NetworkState

getVertexIds() - Method in class io.improbable.keanu.network.SimpleNetworkState

getVerticesThatContributeToMasterP() - Method in class io.improbable.keanu.network.BayesNet

getXMax() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

getXMax() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

getXMax() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

getXMin() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

getXMin() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

getXMin() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

gradient() - Method in class io.improbable.keanu.algorithms.variational.FitnessFunctionWithGradient

GradientOptimizer - Class in io.improbable.keanu.algorithms.variational

GradientOptimizer(BayesNet) - Constructor for class io.improbable.keanu.algorithms.variational.GradientOptimizer

GradientOptimizer(List<Vertex<Double>>) - Constructor for class io.improbable.keanu.algorithms.variational.GradientOptimizer

GreaterThanOrEqualVertex<A extends java.lang.Number,B extends java.lang.Number> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

GreaterThanOrEqualVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.GreaterThanOrEqualVertex

GreaterThanVertex<A extends java.lang.Number,B extends java.lang.Number> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

GreaterThanVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.GreaterThanVertex

groupContinuousPoints(List<ContinuousPoint>) - Method in interface io.improbable.keanu.network.grouping.continuousPointGroupers.ContinuousPointGrouper

groupContinuousPoints(List<ContinuousPoint>) - Method in class io.improbable.keanu.network.grouping.continuousPointGroupers.DBSCANContinuousPointGrouper

groupNetworkStates(List<NetworkState>, List<String>, List<String>) - Method in class io.improbable.keanu.network.grouping.NetworkStateGrouper

H

Hamiltonian - Class in io.improbable.keanu.algorithms.mcmc

Hamiltonian Monte Carlo is a method for obtaining samples from a probability distribution with the introduction of a momentum variable.

hashCode() - Method in class io.improbable.keanu.network.grouping.DiscretePoint

hashCode() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex.Condition

hashCode() - Method in class io.improbable.keanu.vertices.Vertex

I

Identifiable - Interface in io.improbable.keanu

idGenerator - Static variable in class io.improbable.keanu.vertices.Vertex

If(Vertex<Boolean>, Vertex<T>, Vertex<T>) - Static method in class io.improbable.keanu.vertices.bool.BoolVertex

If - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

If() - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.If

If.IfThenBuilder - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

If.IfThenElseBuilder<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

IfThenBuilder(Vertex<Boolean>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.If.IfThenBuilder

IfThenElseBuilder(Vertex<Boolean>, Vertex<T>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.If.IfThenElseBuilder

IfVertex<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

IfVertex(Vertex<Boolean>, Vertex<T>, Vertex<T>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.IfVertex

Infinitesimal - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.diff

Infinitesimal(String, Double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

Infinitesimal(Map<String, Double>) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

inputs - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

inputVertex - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

inputVertex - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

inputVertex - Variable in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

inputVertex - Variable in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

inputVertex - Variable in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

IntegerAbsVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary

IntegerAbsVertex(IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerAbsVertex

IntegerAdditionVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

IntegerAdditionVertex(IntegerVertex, IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerAdditionVertex

IntegerBinaryOpVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

IntegerBinaryOpVertex(IntegerVertex, IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

IntegerDifferenceVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

IntegerDifferenceVertex(IntegerVertex, IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerDifferenceVertex

IntegerDivisionVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

IntegerDivisionVertex(IntegerVertex, IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerDivisionVertex

IntegerMultiplicationVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

IntegerMultiplicationVertex(IntegerVertex, IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerMultiplicationVertex

IntegerUnaryOpLambda<IN> - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary

IntegerUnaryOpLambda(Vertex<IN>, Function<IN, Integer>) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

IntegerUnaryOpVertex - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary

IntegerUnaryOpVertex(IntegerVertex) - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

IntegerVertex - Class in io.improbable.keanu.vertices.intgr

IntegerVertex() - Constructor for class io.improbable.keanu.vertices.intgr.IntegerVertex

io.improbable.keanu - package io.improbable.keanu

io.improbable.keanu.algorithms - package io.improbable.keanu.algorithms

io.improbable.keanu.algorithms.graphtraversal - package io.improbable.keanu.algorithms.graphtraversal

io.improbable.keanu.algorithms.mcmc - package io.improbable.keanu.algorithms.mcmc

io.improbable.keanu.algorithms.mcmc.initialConditions - package io.improbable.keanu.algorithms.mcmc.initialConditions

io.improbable.keanu.algorithms.particleFiltering - package io.improbable.keanu.algorithms.particleFiltering

io.improbable.keanu.algorithms.sampling - package io.improbable.keanu.algorithms.sampling

io.improbable.keanu.algorithms.variational - package io.improbable.keanu.algorithms.variational

io.improbable.keanu.distributions.continuous - package io.improbable.keanu.distributions.continuous

io.improbable.keanu.distributions.discrete - package io.improbable.keanu.distributions.discrete

io.improbable.keanu.network - package io.improbable.keanu.network

io.improbable.keanu.network.grouping - package io.improbable.keanu.network.grouping

io.improbable.keanu.network.grouping.continuousPointGroupers - package io.improbable.keanu.network.grouping.continuousPointGroupers

io.improbable.keanu.plating - package io.improbable.keanu.plating

io.improbable.keanu.randomFactory - package io.improbable.keanu.randomFactory

io.improbable.keanu.util.csv - package io.improbable.keanu.util.csv

io.improbable.keanu.util.csv.pojo - package io.improbable.keanu.util.csv.pojo

io.improbable.keanu.vertices - package io.improbable.keanu.vertices

io.improbable.keanu.vertices.bool - package io.improbable.keanu.vertices.bool

io.improbable.keanu.vertices.bool.nonprobabilistic - package io.improbable.keanu.vertices.bool.nonprobabilistic

io.improbable.keanu.vertices.bool.nonprobabilistic.operators - package io.improbable.keanu.vertices.bool.nonprobabilistic.operators

io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary - package io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary

io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare - package io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple - package io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple

io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary - package io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary

io.improbable.keanu.vertices.bool.probabilistic - package io.improbable.keanu.vertices.bool.probabilistic

io.improbable.keanu.vertices.dbl - package io.improbable.keanu.vertices.dbl

io.improbable.keanu.vertices.dbl.nonprobabilistic - package io.improbable.keanu.vertices.dbl.nonprobabilistic

io.improbable.keanu.vertices.dbl.nonprobabilistic.diff - package io.improbable.keanu.vertices.dbl.nonprobabilistic.diff

io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary - package io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple - package io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple

io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary - package io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

io.improbable.keanu.vertices.dbl.probabilistic - package io.improbable.keanu.vertices.dbl.probabilistic

io.improbable.keanu.vertices.generic.nonprobabilistic - package io.improbable.keanu.vertices.generic.nonprobabilistic

io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary - package io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary

io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary - package io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary

io.improbable.keanu.vertices.generic.probabilistic - package io.improbable.keanu.vertices.generic.probabilistic

io.improbable.keanu.vertices.generic.probabilistic.discrete - package io.improbable.keanu.vertices.generic.probabilistic.discrete

io.improbable.keanu.vertices.intgr - package io.improbable.keanu.vertices.intgr

io.improbable.keanu.vertices.intgr.nonprobabilistic - package io.improbable.keanu.vertices.intgr.nonprobabilistic

io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary - package io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary

io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary - package io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary

io.improbable.keanu.vertices.intgr.probabilistic - package io.improbable.keanu.vertices.intgr.probabilistic

isInImpossibleState() - Method in class io.improbable.keanu.network.BayesNet

isObserved() - Method in class io.improbable.keanu.vertices.Vertex

isProbabilistic() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

isProbabilistic() - Method in class io.improbable.keanu.vertices.bool.probabilistic.ProbabilisticBool

isProbabilistic() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

isProbabilistic() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ProbabilisticDouble

isProbabilistic() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

isProbabilistic() - Method in class io.improbable.keanu.vertices.generic.probabilistic.Probabilistic

isProbabilistic() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

isProbabilistic() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.ProbabilisticInteger

isProbabilistic() - Method in class io.improbable.keanu.vertices.Vertex

A probabilistic vertex is defined as a vertex that is probabilistic.

isTrue(Vertex<Boolean>) - Static method in class io.improbable.keanu.vertices.generic.nonprobabilistic.If

isValidInitialFitness(double) - Static method in class io.improbable.keanu.algorithms.variational.FitnessFunction

L

lambda(Function<Double, Double>, Supplier<DualNumber>) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

lambda(Function<Integer, Integer>) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

Laplace - Class in io.improbable.keanu.distributions.continuous

Laplace() - Constructor for class io.improbable.keanu.distributions.continuous.Laplace

Laplace.Diff - Class in io.improbable.keanu.distributions.continuous

LaplaceVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

LaplaceVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

LaplaceVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

LaplaceVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

LaplaceVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

LatentIncrementSort - Class in io.improbable.keanu.algorithms.particleFiltering

LatentIncrementSort() - Constructor for class io.improbable.keanu.algorithms.particleFiltering.LatentIncrementSort

latentVertices - Variable in class io.improbable.keanu.algorithms.variational.FitnessFunction

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.CastBoolVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.ConstantBoolVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.BoolReduceVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.bool.probabilistic.ProbabilisticBool

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.CastDoubleVertex

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.ConstantDoubleVertex

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ProbabilisticDouble

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.ConstantVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.IfVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.MultiplexerVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.generic.probabilistic.Probabilistic

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.CastIntegerVertex

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.ConstantIntegerVertex

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

lazyEval() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.ProbabilisticInteger

lazyEval() - Method in class io.improbable.keanu.vertices.Vertex

This causes a backwards propagating calculation of the vertex value.

Leapfrog - Class in io.improbable.keanu.algorithms.mcmc

Leapfrog(double, double) - Constructor for class io.improbable.keanu.algorithms.mcmc.Leapfrog

LessThanOrEqualVertex<A extends java.lang.Number,B extends java.lang.Number> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

LessThanOrEqualVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.LessThanOrEqualVertex

LessThanVertex<A extends java.lang.Number,B extends java.lang.Number> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

LessThanVertex(Vertex<A>, Vertex<B>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.LessThanVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

logDensity(Double) - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

logDensity(T) - Method in class io.improbable.keanu.vertices.Vertex

This is the value of the natural log of the probability density at the supplied value.

logDensityAtValue() - Method in class io.improbable.keanu.vertices.Vertex

Just a helper method for a common function

Logistic - Class in io.improbable.keanu.distributions.continuous

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.14 page 27

Logistic() - Constructor for class io.improbable.keanu.distributions.continuous.Logistic

Logistic.Diff - Class in io.improbable.keanu.distributions.continuous

LogisticVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

LogisticVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(double, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(DoubleVertex, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(double, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

LogisticVertex(DoubleVertex, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

logOfTotalProbability() - Method in class io.improbable.keanu.algorithms.variational.FitnessFunction

logPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Beta

logPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Exponential

logPdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gamma

logPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gaussian

logPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Laplace

logPdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Logistic

LogVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

LogVertex(double, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.LogVertex

LogVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.LogVertex

M

M_E - Static variable in class io.improbable.keanu.distributions.continuous.Gamma

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.8 page 33

mapDependencies(Collection<? extends Vertex<?>>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.TopologicalSort

MarkovBlanket - Class in io.improbable.keanu.algorithms.graphtraversal

MarkovBlanket() - Constructor for class io.improbable.keanu.algorithms.graphtraversal.MarkovBlanket

maxAPosteriori(int, NonLinearConjugateGradientOptimizer) - Method in class io.improbable.keanu.algorithms.variational.GradientOptimizer

maxAPosteriori(int) - Method in class io.improbable.keanu.algorithms.variational.GradientOptimizer

maxAPosteriori(int, double) - Method in class io.improbable.keanu.algorithms.variational.NonGradientOptimizer

maxLikelihood(int, NonLinearConjugateGradientOptimizer) - Method in class io.improbable.keanu.algorithms.variational.GradientOptimizer

maxLikelihood(int) - Method in class io.improbable.keanu.algorithms.variational.GradientOptimizer

maxLikelihood(int, double) - Method in class io.improbable.keanu.algorithms.variational.NonGradientOptimizer

MetropolisHastings - Class in io.improbable.keanu.algorithms.mcmc

Metropolis Hastings is a Markov Chain Monte Carlo method for obtaining samples from a probability distribution

MetropolisHastings() - Constructor for class io.improbable.keanu.algorithms.mcmc.MetropolisHastings

minus(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

minus(Vertex<Double>) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

minus(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

minus(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

minus(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

minus(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

minus(Vertex<Integer>) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

minus(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

MultiModeDiscovery - Class in io.improbable.keanu.algorithms.mcmc.initialConditions

MultiModeDiscovery() - Constructor for class io.improbable.keanu.algorithms.mcmc.initialConditions.MultiModeDiscovery

MultiplexerVertex<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

MultiplexerVertex(IntegerVertex, Vertex<T>...) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.MultiplexerVertex

MultiplicationVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

MultiplicationVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.MultiplicationVertex

multiply(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

multiply(Vertex<Double>) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

multiply(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

multiply(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

multiply(Vertex<Integer>) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

multiply(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

multiplyBy(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

multiplyBy(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

N

NetworkSamples - Class in io.improbable.keanu.algorithms

An immutable collection of network samples.

NetworkSamples(Map<String, ? extends List<?>>, int) - Constructor for class io.improbable.keanu.algorithms.NetworkSamples

NetworkState - Interface in io.improbable.keanu.network

Depending on how a NetworkState is being used, it may be significantly more efficient to use one underlying data structure vs another.

NetworkStateGrouper - Class in io.improbable.keanu.network.grouping

This class has the ability to group NetworkStates that are similar.

NetworkStateGrouper(ContinuousPointGrouper) - Constructor for class io.improbable.keanu.network.grouping.NetworkStateGrouper

nextDouble(double, double) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

nextDouble(double, double) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

nextDouble(double, double) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

nextGaussian(double, double) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

nextGaussian(DoubleVertex, double) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

nextGaussian(DoubleVertex, DoubleVertex) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

nextGaussian(double, DoubleVertex) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

nextGaussian(ArithmeticDouble, ArithmeticDouble) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

nextGaussian(double, ArithmeticDouble) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

nextGaussian(ArithmeticDouble, double) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

nextGaussian(double, double) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

nextGaussian(T, T) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

nextGaussian(double, T) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

nextGaussian(T, double) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

nextGaussian(double, double) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

nextGaussian() - Method in interface io.improbable.keanu.randomFactory.RandomFactory

NonGradientOptimizer - Class in io.improbable.keanu.algorithms.variational

NonGradientOptimizer(BayesNet) - Constructor for class io.improbable.keanu.algorithms.variational.NonGradientOptimizer

NonGradientOptimizer(List<Vertex<Double>>) - Constructor for class io.improbable.keanu.algorithms.variational.NonGradientOptimizer

NonProbabilistic<T> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic

NonProbabilistic() - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

NonProbabilisticBool - Class in io.improbable.keanu.vertices.bool.nonprobabilistic

NonProbabilisticBool() - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

NonProbabilisticDouble - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic

NonProbabilisticDouble() - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

NonProbabilisticInteger - Class in io.improbable.keanu.vertices.intgr.nonprobabilistic

NonProbabilisticInteger() - Constructor for class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

NonProbabilisticObservationException - Exception in io.improbable.keanu.vertices

NonProbabilisticObservationException() - Constructor for exception io.improbable.keanu.vertices.NonProbabilisticObservationException

NotEqualsVertex<T> - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare

NotEqualsVertex(Vertex<T>, Vertex<T>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.NotEqualsVertex

NotVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary

NotVertex(Vertex<Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.NotVertex

NumericalEqualsVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators

NumericalEqualsVertex(Vertex<Number>, Vertex<Number>, Vertex<Number>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

Returns true if a is within epsilon of b

O

ObjectParser<T> - Class in io.improbable.keanu.util.csv.pojo

This class parses csv lines to a specified plain old java object (POJO).

ObjectParser(Class<T>, Stream<List<String>>, List<String>) - Constructor for class io.improbable.keanu.util.csv.pojo.ObjectParser

observe(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

Observing non-probabilistic values of this type causes the probability of the graph to flatten to 0 in all places that doesn't exactly match the observation.

observe(Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

Observing non-probabilistic values of this type causes the probability of the graph to flatten to 0 in all places that doesn't exactly match the observation.

observe(T) - Method in class io.improbable.keanu.vertices.Vertex

This marks the vertex's value as being observed and unchangeable.

observeOwnValue() - Method in class io.improbable.keanu.vertices.Vertex

Cause this vertex to observe its own value, for example when generating test data

of(Vertex<Boolean>...) - Static method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT

op(Boolean, Boolean) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.AndBinaryVertex

op(A, B) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpLambda

op(A, B) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

op(T, T) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.EqualsVertex

op(Number, Number) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.GreaterThanOrEqualVertex

Returns true if a is greater than or equal to b

op(Number, Number) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.GreaterThanVertex

Returns true if a is greater than b

op(Number, Number) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.LessThanOrEqualVertex

Returns true if a is less than or equal to b

op(Number, Number) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.LessThanVertex

Returns true if a is less than b

op(T, T) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.compare.NotEqualsVertex

op(Boolean, Boolean) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.OrBinaryVertex

op(A) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpLambda

op(A) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

op(Boolean) - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.NotVertex

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.AdditionVertex

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DifferenceVertex

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DivisionVertex

op - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.MultiplicationVertex

op(Double, Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.PowerVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.AbsVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcCosVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.ArcSinVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.CosVertex

op - Variable in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.LogVertex

op(Double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.SinVertex

op(A, B) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpLambda

op(A, B) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

op(IN) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpLambda

op(IN) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

op(Integer, Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerAdditionVertex

op(Integer, Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

op(Integer, Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerDifferenceVertex

op(Integer, Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerDivisionVertex

op(Integer, Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerMultiplicationVertex

op(Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerAbsVertex

op - Variable in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

op(Integer) - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

optimize(int, double, List<Vertex<?>>) - Method in class io.improbable.keanu.algorithms.variational.NonGradientOptimizer

or(Vertex<Boolean>...) - Method in class io.improbable.keanu.vertices.bool.BoolVertex

OrBinaryVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary

OrBinaryVertex(Vertex<Boolean>, Vertex<Boolean>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.OrBinaryVertex

orDefault(Vertex<T>) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTBuilder

orElse(Vertex<T>) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.If.IfThenElseBuilder

OrMultipleVertex - Class in io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple

OrMultipleVertex(Collection<Vertex<Boolean>>) - Constructor for class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.OrMultipleVertex

P

parse(Class<T>, Stream<List<String>>, List<String>) - Static method in class io.improbable.keanu.util.csv.pojo.ObjectParser

parse(Class<T>, Stream<List<String>>, List<String>, boolean) - Static method in class io.improbable.keanu.util.csv.pojo.ObjectParser

Particle() - Constructor for class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

ParticleFilter - Class in io.improbable.keanu.algorithms.particleFiltering

ParticleFilter() - Constructor for class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter

ParticleFilter.Particle - Class in io.improbable.keanu.algorithms.particleFiltering

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Beta

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Exponential

pdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gamma

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Gaussian

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Laplace

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Logistic

pdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.SmoothUniformDistribution

pdf(double, double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Triangular

pdf(double, double, double) - Static method in class io.improbable.keanu.distributions.continuous.Uniform

pdf(double, int) - Static method in class io.improbable.keanu.distributions.discrete.Poisson

Plate - Class in io.improbable.keanu.plating

Plate() - Constructor for class io.improbable.keanu.plating.Plate

PlateBuilder<T> - Class in io.improbable.keanu.plating

PlateBuilder allows plates to constructed in steps

PlateBuilder() - Constructor for class io.improbable.keanu.plating.PlateBuilder

PlateBuilder.FromCount - Class in io.improbable.keanu.plating

An intermediate builder, with a set count

PlateBuilder.FromCountFactory - Class in io.improbable.keanu.plating

Build some number of plates

PlateBuilder.FromDataFactory - Class in io.improbable.keanu.plating

Build Plates from some provided Data

PlateBuilder.FromIterator - Class in io.improbable.keanu.plating

An intermediate builder, with a set data iterator

Plates - Class in io.improbable.keanu.plating

Plates(int) - Constructor for class io.improbable.keanu.plating.Plates

plus(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

plus(Vertex<Double>) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

plus(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

plus(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

plus(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

plus(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

plus(Vertex<Integer>) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

plus(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

Poisson - Class in io.improbable.keanu.distributions.discrete

Poisson(double, Random) - Constructor for class io.improbable.keanu.distributions.discrete.Poisson

poisson(double, Random) - Static method in class io.improbable.keanu.distributions.discrete.Poisson

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.2.8 page 49

PoissonVertex - Class in io.improbable.keanu.vertices.intgr.probabilistic

PoissonVertex(Vertex<Double>, Random) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

PoissonVertex(double, Random) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

pow(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

pow(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

pow(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

powerTo(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

powerTo(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

PowerVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary

PowerVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.PowerVertex

PowerVertex(DoubleVertex, double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.PowerVertex

Prior - Class in io.improbable.keanu.algorithms.sampling

Prior() - Constructor for class io.improbable.keanu.algorithms.sampling.Prior

Probabilistic<T> - Class in io.improbable.keanu.vertices.generic.probabilistic

Probabilistic() - Constructor for class io.improbable.keanu.vertices.generic.probabilistic.Probabilistic

ProbabilisticBool - Class in io.improbable.keanu.vertices.bool.probabilistic

ProbabilisticBool() - Constructor for class io.improbable.keanu.vertices.bool.probabilistic.ProbabilisticBool

ProbabilisticDouble - Class in io.improbable.keanu.vertices.dbl.probabilistic

ProbabilisticDouble() - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.ProbabilisticDouble

ProbabilisticInteger - Class in io.improbable.keanu.vertices.intgr.probabilistic

ProbabilisticInteger() - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.ProbabilisticInteger

probabilisticVertices - Variable in class io.improbable.keanu.algorithms.variational.FitnessFunction

probability(Function<NetworkState, Boolean>) - Method in class io.improbable.keanu.algorithms.NetworkSamples

probability(Function<T, Boolean>) - Method in class io.improbable.keanu.algorithms.VertexSamples

probeForNonZeroMasterP(int) - Method in class io.improbable.keanu.network.BayesNet

Attempt to find a non-zero master probability by naively sampling vertices in order of data dependency

R

RandomDoubleFactory - Class in io.improbable.keanu.randomFactory

RandomDoubleFactory() - Constructor for class io.improbable.keanu.randomFactory.RandomDoubleFactory

RandomFactory<T> - Interface in io.improbable.keanu.randomFactory

ReadCsv - Class in io.improbable.keanu.util.csv

This class provides static helper functions for loading csv data from various locations.

ReadCsv() - Constructor for class io.improbable.keanu.util.csv.ReadCsv

readLines() - Method in class io.improbable.keanu.util.csv.CsvReader

This will read the entire csv file and return it as a list.

RejectionSampler - Class in io.improbable.keanu.algorithms.sampling

RejectionSampler() - Constructor for class io.improbable.keanu.algorithms.sampling.RejectionSampler

S

sample(BayesNet, List<? extends Vertex<?>>, int) - Static method in class io.improbable.keanu.algorithms.sampling.Prior

sample(double, double, double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Beta

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.2 page 14

sample(double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Exponential

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.8 page 20

sample(double, double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Gamma

sample(double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Gaussian

sample(double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Laplace

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.8 page 25

sample(double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Logistic

sample(double, double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.SmoothUniformDistribution

Will return samples between xMin and xMax as well as samples from the left and right shoulder.

sample(double, double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Triangular

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.24 page 37

sample(double, double, Random) - Static method in class io.improbable.keanu.distributions.continuous.Uniform

Computer Generation of Statistical Distributions by Richard Saucier ARL-TR-2168 March 2000 5.1.8 page 48

sample() - Method in class io.improbable.keanu.distributions.discrete.Poisson

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.CastBoolVertex

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.ConstantBoolVertex

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.binary.BoolBinaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.multiple.BoolReduceVertex

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.NumericalEqualsVertex

sample() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.operators.unary.BoolUnaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.bool.probabilistic.Flip

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.CastDoubleVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.ConstantDoubleVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpLambda

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.binary.DoubleBinaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.multiple.DoubleReduceVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpLambda

sample() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.DoubleUnaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.BetaVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ExponentialVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GammaVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.GaussianVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LaplaceVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.LogisticVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

sample() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.ConstantVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPTVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.IfVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.MultiplexerVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.binary.BinaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.CastIntegerVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.ConstantIntegerVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.binary.IntegerBinaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpLambda

sample() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.operators.unary.IntegerUnaryOpVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.FuzzyCastToIntegerVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.PoissonVertex

sample() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

sample() - Method in class io.improbable.keanu.vertices.Vertex

sampleAndCascade(List<? extends Vertex<?>>) - Static method in class io.improbable.keanu.network.BayesNet

sampleAndCascade(Vertex<T>) - Static method in class io.improbable.keanu.network.BayesNet

samples - Variable in class io.improbable.keanu.algorithms.VertexSamples

SelectVertex<T> - Class in io.improbable.keanu.vertices.generic.probabilistic.discrete

SelectVertex(LinkedHashMap<T, DoubleVertex>, Random) - Constructor for class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

SelectVertex(LinkedHashMap<T, DoubleVertex>) - Constructor for class io.improbable.keanu.vertices.generic.probabilistic.discrete.SelectVertex

setAndCascade(T) - Method in class io.improbable.keanu.vertices.Vertex

This sets the value in this vertex and tells each child vertex about the new change.

setParents(Collection<? extends Vertex<?>>) - Method in class io.improbable.keanu.vertices.Vertex

setParents(Vertex<?>...) - Method in class io.improbable.keanu.vertices.Vertex

setPoint(double[]) - Method in class io.improbable.keanu.algorithms.variational.FitnessFunction

setRandom(Random) - Method in class io.improbable.keanu.randomFactory.DoubleVertexFactory

setRandom(Random) - Method in class io.improbable.keanu.randomFactory.RandomDoubleFactory

setRandom(Random) - Method in interface io.improbable.keanu.randomFactory.RandomFactory

setValue(T) - Method in class io.improbable.keanu.vertices.Vertex

Sets the value if the vertex isn't already observed.

shallowCopy() - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

SimpleNetworkState - Class in io.improbable.keanu.network

SimpleNetworkState(Map<String, ?>) - Constructor for class io.improbable.keanu.network.SimpleNetworkState

SimulatedAnnealing - Class in io.improbable.keanu.algorithms.mcmc

Simulated Annealing is a modified version of Metropolis Hastings that causes the MCMC random walk to tend towards the maximum a posteriori (MAP)

SimulatedAnnealing() - Constructor for class io.improbable.keanu.algorithms.mcmc.SimulatedAnnealing

SimulatedAnnealing.AnnealingSchedule - Interface in io.improbable.keanu.algorithms.mcmc

SinVertex - Class in io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary

SinVertex(double) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.SinVertex

SinVertex(DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.nonprobabilistic.operators.unary.SinVertex

size() - Method in class io.improbable.keanu.algorithms.NetworkSamples

size() - Method in class io.improbable.keanu.plating.Plates

SmoothUniformDistribution - Class in io.improbable.keanu.distributions.continuous

The Smooth Uniform distribution is the usual Uniform distribution with the edges at max and min smoothed by attaching a sigmoid as shoulders.

SmoothUniformVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

SmoothUniformVertex(DoubleVertex, DoubleVertex, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

SmoothUniformVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

SmoothUniformVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

SmoothUniformVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.SmoothUniformVertex

sort(Collection<? extends Vertex<?>>) - Static method in class io.improbable.keanu.algorithms.graphtraversal.TopologicalSort

sort(Collection<? extends Vertex<?>>) - Static method in class io.improbable.keanu.algorithms.particleFiltering.LatentIncrementSort

Orders observed vertices by the smallest increment of additional latent vertices upstream of the observed vertex.

sortDescending(ParticleFilter.Particle, ParticleFilter.Particle) - Static method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

stream(boolean) - Method in class io.improbable.keanu.util.csv.pojo.ObjectParser

stream() - Method in class io.improbable.keanu.util.csv.pojo.ObjectParser

streamLines() - Method in class io.improbable.keanu.util.csv.CsvReader

Read all lines from the csv file one at a time without ever holding the entire csv file in memory

subtract(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

subtract(Infinitesimal) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.Infinitesimal

T

then(Vertex<T>) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTBuilder.CPTWhenBuilder

then(Vertex<T>) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTWhenRawBuilder

then(Vertex<T>) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.If.IfThenBuilder

times(DoubleVertex) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

times(double) - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

times(DualNumber) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

times(double) - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

times(IntegerVertex) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

times(int) - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

toNetworkStates() - Method in class io.improbable.keanu.algorithms.NetworkSamples

TopologicalSort - Class in io.improbable.keanu.algorithms.graphtraversal

TopologicalSort() - Constructor for class io.improbable.keanu.algorithms.graphtraversal.TopologicalSort

Triangular - Class in io.improbable.keanu.distributions.continuous

Triangular() - Constructor for class io.improbable.keanu.distributions.continuous.Triangular

TriangularVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

TriangularVertex(DoubleVertex, DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

TriangularVertex(DoubleVertex, DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.TriangularVertex

TRUE - Static variable in class io.improbable.keanu.vertices.bool.BoolVertex

U

unaryMinus() - Method in class io.improbable.keanu.vertices.dbl.DoubleVertex

unaryMinus() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.diff.DualNumber

unaryMinus() - Method in class io.improbable.keanu.vertices.intgr.IntegerVertex

UnaryOpLambda<IN,OUT> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary

UnaryOpLambda(Vertex<IN>, Function<IN, OUT>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpLambda

UnaryOpVertex<IN,OUT> - Class in io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary

UnaryOpVertex(Vertex<IN>) - Constructor for class io.improbable.keanu.vertices.generic.nonprobabilistic.operators.unary.UnaryOpVertex

Uniform - Class in io.improbable.keanu.distributions.continuous

Uniform() - Constructor for class io.improbable.keanu.distributions.continuous.Uniform

UniformIntVertex - Class in io.improbable.keanu.vertices.intgr.probabilistic

UniformIntVertex(Vertex<Integer>, Vertex<Integer>, Random) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

UniformIntVertex(Vertex<Integer>, Vertex<Integer>) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

UniformIntVertex(int, int) - Constructor for class io.improbable.keanu.vertices.intgr.probabilistic.UniformIntVertex

UniformVertex - Class in io.improbable.keanu.vertices.dbl.probabilistic

UniformVertex(DoubleVertex, DoubleVertex, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

UniformVertex(DoubleVertex, DoubleVertex) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

UniformVertex(double, double, Random) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

UniformVertex(double, double) - Constructor for class io.improbable.keanu.vertices.dbl.probabilistic.UniformVertex

unobserve() - Method in class io.improbable.keanu.vertices.Vertex

updateChildren() - Method in class io.improbable.keanu.vertices.Vertex

This causes this vertex's value to propagate to child vertices.

updateSumLogPOfSubgraph() - Method in class io.improbable.keanu.algorithms.particleFiltering.ParticleFilter.Particle

updateValue() - Method in class io.improbable.keanu.vertices.bool.nonprobabilistic.NonProbabilisticBool

updateValue() - Method in class io.improbable.keanu.vertices.bool.probabilistic.ProbabilisticBool

updateValue() - Method in class io.improbable.keanu.vertices.dbl.nonprobabilistic.NonProbabilisticDouble

updateValue() - Method in class io.improbable.keanu.vertices.dbl.probabilistic.ProbabilisticDouble

updateValue() - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.NonProbabilistic

updateValue() - Method in class io.improbable.keanu.vertices.generic.probabilistic.Probabilistic

updateValue() - Method in class io.improbable.keanu.vertices.intgr.nonprobabilistic.NonProbabilisticInteger

updateValue() - Method in class io.improbable.keanu.vertices.intgr.probabilistic.ProbabilisticInteger

updateValue() - Method in class io.improbable.keanu.vertices.Vertex

This causes a non-probabilistic vertex to recalculate it's value based off it's current parent values.

V

Vertex<T> - Class in io.improbable.keanu.vertices

Vertex() - Constructor for class io.improbable.keanu.vertices.Vertex

VertexSamples<T> - Class in io.improbable.keanu.algorithms

VertexSamples(List<T>) - Constructor for class io.improbable.keanu.algorithms.VertexSamples

W

when(boolean...) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTBuilder

when(boolean...) - Method in class io.improbable.keanu.vertices.generic.nonprobabilistic.CPT.CPTRawBuilder

withDelimiter(String) - Method in class io.improbable.keanu.util.csv.CsvReader

Defaults to a comma "," but could be \t for tab separated files or something else.

withFactory(Consumer<Plate>) - Method in class io.improbable.keanu.plating.PlateBuilder.FromCount

Set the Plate factory method, taking no additional data

withFactory(BiConsumer<Plate, T>) - Method in class io.improbable.keanu.plating.PlateBuilder.FromIterator

Set the Plate factory method, taking additional data

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