VariantSchemas

Value Members

1. final def !=(arg0: Any): Boolean

   

   Definition Classes

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2. final def ##(): Int

   

   Definition Classes

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3. final def ==(arg0: Any): Boolean

   

   Definition Classes

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4. val alleleDepthsField: StructField

   

5. val alleleOneField: StructField

   

6. val alleleTwoField: StructField

   

7. val alternateAllelesField: StructField

   

8. final def asInstanceOf[T0]: T0

   

   Definition Classes

   Any

9. val attributesField: StructField

   

10. def bgenDefaultSchema(hasSampleIds: Boolean): StructType

    

11. def bgenGenotypesField(hasSampleIds: Boolean): StructField

    

12. val bimSchema: StructType

    

13. val callsField: StructField

    

14. def clone(): AnyRef

    

    Attributes

    protected[java.lang]

    Definition Classes

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    Annotations

    @throws( ... )

15. val conditionalQualityField: StructField

    

16. val contigNameField: StructField

    

17. val csqFieldName: String

    

18. val depthField: StructField

    

19. val endField: StructField

    

20. final def eq(arg0: AnyRef): Boolean

    

    Definition Classes

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21. def equals(arg0: Any): Boolean

    

    Definition Classes

    AnyRef → Any

22. val filtersField: StructField

    

23. def finalize(): Unit

    

    Attributes

    protected[java.lang]

    Definition Classes

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    Annotations

    @throws( classOf[java.lang.Throwable] )

24. val genotypeFiltersField: StructField

    

25. val genotypeLikelihoodsField: StructField

    

26. val genotypesFieldName: String

    

27. final def getClass(): Class[_]

    

    Definition Classes

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28. def hashCode(): Int

    

    Definition Classes

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29. val headerBlockIdField: StructField

    

30. val headerField: StructField

    

31. val infoFieldPrefix: String

    

32. final def isInstanceOf[T0]: Boolean

    

    Definition Classes

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33. val meanField: StructField

    

34. val namesField: StructField

    

35. final def ne(arg0: AnyRef): Boolean

    

    Definition Classes

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36. final def notify(): Unit

    

    Definition Classes

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37. final def notifyAll(): Unit

    

    Definition Classes

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38. val otherFieldsField: StructField

    

39. val phasedField: StructField

    

40. val phredLikelihoodsField: StructField

    

41. val plinkBaseSchema: StructType

    

42. def plinkGenotypeSchema(hasSampleIds: Boolean): StructField

    

43. def plinkSchema(hasSampleIds: Boolean): StructType

    

44. val ploidyField: StructField

    

45. val positionField: StructField

    

46. val posteriorProbabilitiesField: StructField

    

47. val qualField: StructField

    

48. val refAlleleField: StructField

    

49. val sampleBlockIdField: StructField

    

50. val sampleIdField: StructField

    

51. val sizeField: StructField

    

52. val sortKeyField: StructField

    

53. val splitFromMultiAllelicField: StructField

    

54. val startField: StructField

    

55. val stdDevField: StructField

    

56. final def synchronized[T0](arg0: ⇒ T0): T0

    

    Definition Classes

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57. def toString(): String

    

    Definition Classes

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58. val valuesField: StructField

    

59. val variantIdField: StructField

    

60. val vcfBaseSchema: StructType

    

61. final def wait(): Unit

    

    Definition Classes

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    Annotations

    @throws( ... )

62. final def wait(arg0: Long, arg1: Int): Unit

    

    Definition Classes

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    Annotations

    @throws( ... )

63. final def wait(arg0: Long): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )